Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 AC008687.6-201ENST00000596318 630 ntBASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 UNC93B4-201ENST00000505679 747 ntBASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 UNC93B5-201ENST00000530315 699 ntBASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.33■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.33■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 AC087289.5-201ENST00000586076 3175 ntBASIC17.33■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.33■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AC008403.3-201ENST00000598924 454 ntBASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms