Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 UBE2SP1-201ENST00000450587 669 ntBASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 SLC25A24-204ENST00000569674 2357 ntBASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms