Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 AC097381.1-201ENST00000429019 1296 ntBASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 LETM1P2-201ENST00000597330 2178 ntBASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV18A0A075B6X5 KRT16P6-202ENST00000425692 1426 ntBASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 KRT8P17-201ENST00000453110 1448 ntBASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 AC087633.2-202ENST00000565166 1439 ntBASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
TRAV18A0A075B6X5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 AP001271.2-201ENST00000624018 1556 ntBASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV18A0A075B6X5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 HTR7P1-202ENST00000624664 4411 ntBASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms