Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LYSMD3Q7Z3D4 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LYSMD3Q7Z3D4 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
LYSMD3Q7Z3D4 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LYSMD3Q7Z3D4 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
LYSMD3Q7Z3D4 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LYSMD3Q7Z3D4 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LYSMD3Q7Z3D4 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
LYSMD3Q7Z3D4 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.5□□□□□ -1.21
LYSMD3Q7Z3D4 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.5□□□□□ -1.21
LYSMD3Q7Z3D4 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AL359694.2-201ENST00000567753 1615 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 MTCO1P11-201ENST00000429111 1528 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 RBMX2P2-201ENST00000257020 946 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 RPL11P4-201ENST00000332269 436 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 RN7SKP211-201ENST00000363328 315 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 RNU6-254P-201ENST00000363377 107 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 Y_RNA.138-201ENST00000363462 102 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 Y_RNA.144-201ENST00000363521 113 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AC008171.1-201ENST00000395058 200 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 RPL10P10-201ENST00000403509 664 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 GSTA9P-201ENST00000406231 611 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AL009174.1-201ENST00000426577 416 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 YWHAEP5-201ENST00000431545 765 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AL451074.3-201ENST00000437709 472 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 CR391992.1-201ENST00000438601 394 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 SNX18P9-201ENST00000440580 835 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 HMGB3P9-201ENST00000441799 583 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 OFD1P4Y-201ENST00000455273 1179 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AC004692.1-201ENST00000455430 424 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AC013429.1-201ENST00000456604 422 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 OR13C1P-201ENST00000457612 963 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 ARPC3P2-201ENST00000457786 533 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 FAM172BP-201ENST00000487497 1089 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 MTCO2P4-201ENST00000517968 247 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AC138749.2-201ENST00000566048 167 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 ATP5F1P7-201ENST00000567330 760 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AL035413.2-201ENST00000604801 525 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AL109936.2-201ENST00000605350 650 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AL445670.1-201ENST00000618889 801 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AL139089.1-201ENST00000620372 975 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 YWHAEP7-203ENST00000622054 312 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AC018692.2-201ENST00000624130 348 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AC099667.1-201ENST00000624222 469 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 SNORA43.5-201ENST00000631270 138 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AC233280.20-201ENST00000637412 416 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 MT-RNR2-201ENST00000387347 1559 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 FOLH1B-202ENST00000529567 2145 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 AC125603.4-201ENST00000621942 2699 ntBASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
LYSMD3Q7Z3D4 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC104162.1-201ENST00000430831 2382 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 CTAGE11P-201ENST00000451540 2353 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 HSPA8P17-201ENST00000427029 1382 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 434.1 ms