RNA–Protein interactions for RNA: ENST00000363377.1

RNU6-254P-201, Transcript of RNA, U6 small nuclear 254, pseudogene, humanhuman

BASIC

Gene RNU6-254P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-254P-201ENST00000363377 AEBP2Q6ZN18 517 aaPredicted RBP24.02■■□□□ 1.44
RNU6-254P-201ENST00000363377 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
RNU6-254P-201ENST00000363377 SENP3Q9H4L4 574 aaPredicted RBP20.64■□□□□ 0.89
RNU6-254P-201ENST00000363377 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
RNU6-254P-201ENST00000363377 FOXD1Q16676 465 aa19.22■□□□□ 0.67
RNU6-254P-201ENST00000363377 POTEDQ86YR6 584 aa18.36■□□□□ 0.53
RNU6-254P-201ENST00000363377 MSH5O43196 834 aa18.22■□□□□ 0.51
RNU6-254P-201ENST00000363377 PIAS4Q8N2W9 510 aaPredicted RBP17.85■□□□□ 0.45
RNU6-254P-201ENST00000363377 PLPPR3Q6T4P5 718 aa17.83■□□□□ 0.44
RNU6-254P-201ENST00000363377 PPP6R1Q9UPN7 881 aa17.65■□□□□ 0.42
RNU6-254P-201ENST00000363377 ADRA2BP18089 450 aa17.55■□□□□ 0.4
RNU6-254P-201ENST00000363377 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
RNU6-254P-201ENST00000363377 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
RNU6-254P-201ENST00000363377 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
RNU6-254P-201ENST00000363377 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
RNU6-254P-201ENST00000363377 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
RNU6-254P-201ENST00000363377 PPP4R3CPQ6ZMV5 832 aa15.53■□□□□ 0.08
RNU6-254P-201ENST00000363377 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
RNU6-254P-201ENST00000363377 RNF39Q9H2S5 420 aa15.48■□□□□ 0.07
RNU6-254P-201ENST00000363377 CNKSR2Q8WXI2 1034 aa15.38■□□□□ 0.05
RNU6-254P-201ENST00000363377 RNF216Q9NWF9 866 aaPredicted RBP15.35■□□□□ 0.05
RNU6-254P-201ENST00000363377 C1QBPQ07021 282 aaKnown RBP15.28■□□□□ 0.04
RNU6-254P-201ENST00000363377 DNAJC5BQ9UF47 199 aa15.24■□□□□ 0.03
RNU6-254P-201ENST00000363377 NCBP3Q53F19 620 aaKnown RBP14.87□□□□□ -0.03
RNU6-254P-201ENST00000363377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
RNU6-254P-201ENST00000363377 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
RNU6-254P-201ENST00000363377 U3KPZ7 1027 aaPredicted RBP14.4□□□□□ -0.1
RNU6-254P-201ENST00000363377 DSG3P32926 999 aa14.35□□□□□ -0.11
RNU6-254P-201ENST00000363377 POTEHQ6S545 545 aa14.33□□□□□ -0.12
RNU6-254P-201ENST00000363377 CAPN15O75808 1086 aa14.28□□□□□ -0.12
RNU6-254P-201ENST00000363377 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
RNU6-254P-201ENST00000363377 APLP2Q06481 763 aa14.08□□□□□ -0.16
RNU6-254P-201ENST00000363377 SLC4A2P04920 1241 aa14.04□□□□□ -0.16
RNU6-254P-201ENST00000363377 ZNF219Q9P2Y4 722 aaPredicted RBP14.01□□□□□ -0.17
RNU6-254P-201ENST00000363377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.97□□□□□ -0.17
RNU6-254P-201ENST00000363377 HNRNPUL2Q1KMD3 747 aaKnown RBP13.97□□□□□ -0.17
RNU6-254P-201ENST00000363377 TRHP20396 242 aaPredicted RBP13.94□□□□□ -0.18
RNU6-254P-201ENST00000363377 KCNA4P22459 653 aa13.93□□□□□ -0.18
RNU6-254P-201ENST00000363377 ABCB7O75027 752 aa13.86□□□□□ -0.19
RNU6-254P-201ENST00000363377 SAMD1Q6SPF0 538 aaPredicted RBP13.84□□□□□ -0.19
RNU6-254P-201ENST00000363377 RBM42Q9BTD8 480 aaKnown RBP13.75□□□□□ -0.21
RNU6-254P-201ENST00000363377 CHRDL2Q6WN34 429 aa13.55□□□□□ -0.24
RNU6-254P-201ENST00000363377 MYCNP04198 464 aaPredicted RBP13.54□□□□□ -0.24
RNU6-254P-201ENST00000363377 POLA2Q14181 598 aa13.52□□□□□ -0.25
RNU6-254P-201ENST00000363377 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
RNU6-254P-201ENST00000363377 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
RNU6-254P-201ENST00000363377 SP7Q8TDD2 431 aaPredicted RBP13.26□□□□□ -0.29
RNU6-254P-201ENST00000363377 REM2Q8IYK8 340 aaPredicted RBP13.18□□□□□ -0.3
RNU6-254P-201ENST00000363377 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
RNU6-254P-201ENST00000363377 ATF5Q9Y2D1 282 aaPredicted RBP13.17□□□□□ -0.3
RNU6-254P-201ENST00000363377 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
RNU6-254P-201ENST00000363377 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
RNU6-254P-201ENST00000363377 OSCARQ8IYS5 282 aa13.06□□□□□ -0.32
RNU6-254P-201ENST00000363377 FXR2P51116 673 aaKnown RBP eCLIP13.04□□□□□ -0.32
RNU6-254P-201ENST00000363377 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
RNU6-254P-201ENST00000363377 HAX1O00165 279 aa12.98□□□□□ -0.33
RNU6-254P-201ENST00000363377 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
RNU6-254P-201ENST00000363377 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
RNU6-254P-201ENST00000363377 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
RNU6-254P-201ENST00000363377 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
RNU6-254P-201ENST00000363377 ZBTB22O15209 634 aa12.77□□□□□ -0.37
RNU6-254P-201ENST00000363377 FBLN2P98095 1184 aa12.77□□□□□ -0.37
RNU6-254P-201ENST00000363377 EVX2Q03828 476 aa12.76□□□□□ -0.37
RNU6-254P-201ENST00000363377 SPDYE1Q8NFV5 336 aaPredicted RBP12.71□□□□□ -0.37
RNU6-254P-201ENST00000363377 PRKAR2AP13861 404 aaKnown RBP12.67□□□□□ -0.38
RNU6-254P-201ENST00000363377 C19orf67A6NJJ6 358 aa12.63□□□□□ -0.39
RNU6-254P-201ENST00000363377 SSUH2Q9Y2M2 353 aa12.62□□□□□ -0.39
RNU6-254P-201ENST00000363377 CLEC11AQ9Y240 323 aa12.6□□□□□ -0.39
RNU6-254P-201ENST00000363377 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.4
RNU6-254P-201ENST00000363377 MKRN4PQ13434 485 aaPredicted RBP12.57□□□□□ -0.4
RNU6-254P-201ENST00000363377 GABBR2O75899 941 aa12.5□□□□□ -0.41
RNU6-254P-201ENST00000363377 LHX8Q68G74 356 aa12.43□□□□□ -0.42
RNU6-254P-201ENST00000363377 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
RNU6-254P-201ENST00000363377 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
RNU6-254P-201ENST00000363377 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
RNU6-254P-201ENST00000363377 CLCN6P51797 869 aa12.35□□□□□ -0.43
RNU6-254P-201ENST00000363377 FARP1Q9Y4F1 1045 aaPredicted RBP12.25□□□□□ -0.45
RNU6-254P-201ENST00000363377 CD44P16070 742 aaKnown RBP12.24□□□□□ -0.45
RNU6-254P-201ENST00000363377 POTEIP0CG38 1075 aa12.22□□□□□ -0.45
RNU6-254P-201ENST00000363377 ZNF579Q8NAF0 562 aaKnown RBP12.09□□□□□ -0.47
RNU6-254P-201ENST00000363377 DCBLD2Q96PD2 775 aa12.08□□□□□ -0.48
RNU6-254P-201ENST00000363377 STAG3Q9UJ98 1225 aa12.04□□□□□ -0.48
RNU6-254P-201ENST00000363377 ZRANB1Q9UGI0 708 aa12□□□□□ -0.49
RNU6-254P-201ENST00000363377 CREBZFQ9NS37 354 aa11.99□□□□□ -0.49
RNU6-254P-201ENST00000363377 GALR2O43603 387 aaPredicted RBP11.9□□□□□ -0.5
RNU6-254P-201ENST00000363377 PAK3O75914 559 aaPredicted RBP11.87□□□□□ -0.51
RNU6-254P-201ENST00000363377 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
RNU6-254P-201ENST00000363377 OTUD5Q96G74 571 aa11.86□□□□□ -0.51
RNU6-254P-201ENST00000363377 PLSCR2Q9NRY7 297 aa11.84□□□□□ -0.51
RNU6-254P-201ENST00000363377 NPM1P06748 294 aaKnown RBP eCLIP11.82□□□□□ -0.52
RNU6-254P-201ENST00000363377 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
RNU6-254P-201ENST00000363377 POTEB2H3BUK9 544 aa11.8□□□□□ -0.52
RNU6-254P-201ENST00000363377 MNX1P50219 401 aaPredicted RBP11.77□□□□□ -0.53
RNU6-254P-201ENST00000363377 PHF12Q96QT6 1004 aa11.76□□□□□ -0.53
RNU6-254P-201ENST00000363377 PELP1Q8IZL8 1130 aaKnown RBP11.71□□□□□ -0.53
RNU6-254P-201ENST00000363377 ASTLQ6HA08 431 aaPredicted RBP11.7□□□□□ -0.54
RNU6-254P-201ENST00000363377 POTEMA6NI47 508 aa11.69□□□□□ -0.54
RNU6-254P-201ENST00000363377 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
RNU6-254P-201ENST00000363377 C7P10643 843 aa11.67□□□□□ -0.54
RNU6-254P-201ENST00000363377 SLC39A7Q92504 469 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms