Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 HSPA8P17-201ENST00000427029 1382 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 APOL2-202ENST00000358502 2551 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC114980.1-201ENST00000505668 3157 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 STXBP5L-204ENST00000471454 3813 ntAPPRIS ALT1 TSL 2 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 ZNF519P1-201ENST00000449011 1626 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AC002480.4-201ENST00000414116 2592 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AL669831.5-218ENST00000591702 1873 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 ASCC1-202ENST00000317168 2002 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 RNA5SP242-201ENST00000364171 118 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 MIR23A-201ENST00000385245 73 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 SNORD65C-201ENST00000390962 71 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 HMGB1P10-201ENST00000395823 563 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 PDCL2P1-201ENST00000419302 352 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 NPM1P18-201ENST00000434232 732 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 RPL39P6-201ENST00000448289 150 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 RPL7P31-201ENST00000450192 724 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AC105918.1-201ENST00000474399 838 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AC096743.1-201ENST00000485172 319 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AF213884.1-201ENST00000488102 463 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 EIF3LP3-201ENST00000495197 822 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 DUTP7-201ENST00000507982 486 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 ATP1B1P1-201ENST00000509767 915 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 OR7K1P-201ENST00000546439 926 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AC105275.2-201ENST00000567907 711 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 MIR1273E-201ENST00000581165 102 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AC009220.3-201ENST00000604318 586 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AL121890.2-201ENST00000617644 465 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AP005431.1-201ENST00000618479 319 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AL122023.1-201ENST00000622847 530 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 GPATCH11-202ENST00000409774 3906 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 LINC00703-202ENST00000454152 2390 ntTSL 2 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AL590763.1-201ENST00000398297 1545 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 C2orf42-201ENST00000264434 2581 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 CCAT2-201ENST00000630920 1752 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 FAM111A-211ENST00000533703 4202 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 AC004491.1-201ENST00000623029 1882 ntBASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL25A1Q9BXS0 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 TP63-210ENST00000440651 2031 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 LINC01180-201ENST00000589259 2025 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 HSP90AB2P-201ENST00000507090 2176 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 SYNE1-217ENST00000466159 2610 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 Y_RNA.72-201ENST00000362894 103 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 RNU6-660P-201ENST00000364566 109 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 RNU6-767P-201ENST00000384132 107 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 RNU6-1105P-201ENST00000384774 107 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms