RNA–Protein interactions for RNA: ENST00000448289.1

RPL39P6-201, Transcript of ribosomal protein L39 pseudogene 6, humanhuman

BASIC

Gene RPL39P6, Length 150 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P6-201ENST00000448289 AEBP2Q6ZN18 517 aaPredicted RBP21.45■■□□□ 1.02
RPL39P6-201ENST00000448289 CHIC1Q5VXU3 224 aa20.76■□□□□ 0.91
RPL39P6-201ENST00000448289 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
RPL39P6-201ENST00000448289 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
RPL39P6-201ENST00000448289 FOXD1Q16676 465 aa16.95■□□□□ 0.3
RPL39P6-201ENST00000448289 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
RPL39P6-201ENST00000448289 PPP6R1Q9UPN7 881 aa16.18■□□□□ 0.18
RPL39P6-201ENST00000448289 ADRA2BP18089 450 aa16.15■□□□□ 0.18
RPL39P6-201ENST00000448289 PIAS4Q8N2W9 510 aaPredicted RBP15.92■□□□□ 0.14
RPL39P6-201ENST00000448289 MSH5O43196 834 aa15.75■□□□□ 0.11
RPL39P6-201ENST00000448289 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
RPL39P6-201ENST00000448289 PPP4R3CPQ6ZMV5 832 aa14.77□□□□□ -0.05
RPL39P6-201ENST00000448289 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
RPL39P6-201ENST00000448289 MAPK8IP2Q13387 824 aaPredicted RBP14.71□□□□□ -0.05
RPL39P6-201ENST00000448289 DMRT2Q9Y5R5 561 aa14.5□□□□□ -0.09
RPL39P6-201ENST00000448289 CNKSR2Q8WXI2 1034 aa14.38□□□□□ -0.11
RPL39P6-201ENST00000448289 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
RPL39P6-201ENST00000448289 KCNA4P22459 653 aa14.26□□□□□ -0.13
RPL39P6-201ENST00000448289 RNF216Q9NWF9 866 aaPredicted RBP14.15□□□□□ -0.14
RPL39P6-201ENST00000448289 HOXD11P31277 338 aaPredicted RBP14.14□□□□□ -0.15
RPL39P6-201ENST00000448289 NPM3O75607 178 aaKnown RBP14.13□□□□□ -0.15
RPL39P6-201ENST00000448289 DCAF8L1A6NGE4 600 aa13.89□□□□□ -0.19
RPL39P6-201ENST00000448289 DNAJC5BQ9UF47 199 aa13.72□□□□□ -0.21
RPL39P6-201ENST00000448289 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
RPL39P6-201ENST00000448289 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
RPL39P6-201ENST00000448289 RNF39Q9H2S5 420 aa13.51□□□□□ -0.25
RPL39P6-201ENST00000448289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.25
RPL39P6-201ENST00000448289 SLC4A2P04920 1241 aa13.4□□□□□ -0.26
RPL39P6-201ENST00000448289 U3KPZ7 1027 aaPredicted RBP13.25□□□□□ -0.29
RPL39P6-201ENST00000448289 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
RPL39P6-201ENST00000448289 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
RPL39P6-201ENST00000448289 ZBTB22O15209 634 aa13.13□□□□□ -0.31
RPL39P6-201ENST00000448289 MYCNP04198 464 aaPredicted RBP13.04□□□□□ -0.32
RPL39P6-201ENST00000448289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
RPL39P6-201ENST00000448289 HNRNPUL2Q1KMD3 747 aaKnown RBP12.99□□□□□ -0.33
RPL39P6-201ENST00000448289 EHMT2Q96KQ7 1210 aa12.97□□□□□ -0.33
RPL39P6-201ENST00000448289 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
RPL39P6-201ENST00000448289 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
RPL39P6-201ENST00000448289 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
RPL39P6-201ENST00000448289 CAPN15O75808 1086 aa12.88□□□□□ -0.35
RPL39P6-201ENST00000448289 APLP2Q06481 763 aa12.87□□□□□ -0.35
RPL39P6-201ENST00000448289 TRHP20396 242 aaPredicted RBP12.78□□□□□ -0.36
RPL39P6-201ENST00000448289 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
RPL39P6-201ENST00000448289 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
RPL39P6-201ENST00000448289 DSG3P32926 999 aa12.71□□□□□ -0.37
RPL39P6-201ENST00000448289 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
RPL39P6-201ENST00000448289 ABCB7O75027 752 aa12.63□□□□□ -0.39
RPL39P6-201ENST00000448289 POLA2Q14181 598 aa12.54□□□□□ -0.4
RPL39P6-201ENST00000448289 ZBTB12Q9Y330 459 aaPredicted RBP12.28□□□□□ -0.44
RPL39P6-201ENST00000448289 FBLN2P98095 1184 aa12.18□□□□□ -0.46
RPL39P6-201ENST00000448289 MKRN4PQ13434 485 aaPredicted RBP12.18□□□□□ -0.46
RPL39P6-201ENST00000448289 OSCARQ8IYS5 282 aa12.13□□□□□ -0.47
RPL39P6-201ENST00000448289 POTEHQ6S545 545 aa12.09□□□□□ -0.47
RPL39P6-201ENST00000448289 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
RPL39P6-201ENST00000448289 SPDYE2BA6NHP3 402 aa11.96□□□□□ -0.49
RPL39P6-201ENST00000448289 SPDYE6P0CI01 402 aa11.96□□□□□ -0.49
RPL39P6-201ENST00000448289 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
RPL39P6-201ENST00000448289 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
RPL39P6-201ENST00000448289 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
RPL39P6-201ENST00000448289 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
RPL39P6-201ENST00000448289 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
RPL39P6-201ENST00000448289 REM2Q8IYK8 340 aaPredicted RBP11.81□□□□□ -0.52
RPL39P6-201ENST00000448289 CHRDL2Q6WN34 429 aa11.79□□□□□ -0.52
RPL39P6-201ENST00000448289 PABPN1Q86U42 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
RPL39P6-201ENST00000448289 PITPNM1O00562 1244 aa11.68□□□□□ -0.54
RPL39P6-201ENST00000448289 FKBP8Q14318 412 aa11.67□□□□□ -0.54
RPL39P6-201ENST00000448289 SPDYE1Q8NFV5 336 aaPredicted RBP11.64□□□□□ -0.55
RPL39P6-201ENST00000448289 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
RPL39P6-201ENST00000448289 PROM2Q8N271 834 aa11.59□□□□□ -0.55
RPL39P6-201ENST00000448289 PIP4P2Q8N4L2 257 aa11.54□□□□□ -0.56
RPL39P6-201ENST00000448289 FXR2P51116 673 aaKnown RBP eCLIP11.49□□□□□ -0.57
RPL39P6-201ENST00000448289 PRR29P0C7W0 189 aa11.48□□□□□ -0.57
RPL39P6-201ENST00000448289 STAG3Q9UJ98 1225 aa11.48□□□□□ -0.57
RPL39P6-201ENST00000448289 PRKAR2AP13861 404 aaKnown RBP11.38□□□□□ -0.59
RPL39P6-201ENST00000448289 CHADLQ6NUI6 762 aa11.36□□□□□ -0.59
RPL39P6-201ENST00000448289 SP7Q8TDD2 431 aaPredicted RBP11.33□□□□□ -0.6
RPL39P6-201ENST00000448289 CREBZFQ9NS37 354 aa11.3□□□□□ -0.6
RPL39P6-201ENST00000448289 HAX1O00165 279 aa11.28□□□□□ -0.6
RPL39P6-201ENST00000448289 EVX2Q03828 476 aa11.27□□□□□ -0.61
RPL39P6-201ENST00000448289 FBXO3Q9UK99 471 aa11.27□□□□□ -0.61
RPL39P6-201ENST00000448289 FARP1Q9Y4F1 1045 aaPredicted RBP11.22□□□□□ -0.61
RPL39P6-201ENST00000448289 MIER1Q8N108 512 aa11.21□□□□□ -0.61
RPL39P6-201ENST00000448289 MNX1P50219 401 aaPredicted RBP11.17□□□□□ -0.62
RPL39P6-201ENST00000448289 PLCD3Q8N3E9 789 aa11.17□□□□□ -0.62
RPL39P6-201ENST00000448289 VASPP50552 380 aaPredicted RBP11.14□□□□□ -0.63
RPL39P6-201ENST00000448289 PLEKHG5O94827 1062 aa11.13□□□□□ -0.63
RPL39P6-201ENST00000448289 C19orf67A6NJJ6 358 aa11.1□□□□□ -0.63
RPL39P6-201ENST00000448289 NPM1P06748 294 aaKnown RBP eCLIP11.08□□□□□ -0.64
RPL39P6-201ENST00000448289 CD44P16070 742 aaKnown RBP11.04□□□□□ -0.64
RPL39P6-201ENST00000448289 ZBTB47Q9UFB7 747 aaPredicted RBP11.04□□□□□ -0.64
RPL39P6-201ENST00000448289 IFNLR1Q8IU57 520 aaPredicted RBP11□□□□□ -0.65
RPL39P6-201ENST00000448289 KLHL34Q8N239 644 aa10.98□□□□□ -0.65
RPL39P6-201ENST00000448289 ZRANB1Q9UGI0 708 aa10.96□□□□□ -0.65
RPL39P6-201ENST00000448289 NUBP1P53384 320 aa10.95□□□□□ -0.66
RPL39P6-201ENST00000448289 RASEFQ8IZ41 740 aa10.95□□□□□ -0.66
RPL39P6-201ENST00000448289 PAK3O75914 559 aaPredicted RBP10.94□□□□□ -0.66
RPL39P6-201ENST00000448289 GABBR2O75899 941 aa10.93□□□□□ -0.66
RPL39P6-201ENST00000448289 TSPYL2Q9H2G4 693 aaPredicted RBP10.93□□□□□ -0.66
RPL39P6-201ENST00000448289 ZNF579Q8NAF0 562 aaKnown RBP10.89□□□□□ -0.67
RPL39P6-201ENST00000448289 SPOCK2Q92563 424 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms