Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
ALDH1A1P00352 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ALDH1A1P00352 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
ALDH1A1P00352 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ALDH1A1P00352 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ALDH1A1P00352 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
ALDH1A1P00352 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 AL080317.3-201ENST00000607434 4315 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
ALDH1A1P00352 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ALDH1A1P00352 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ALDH1A1P00352 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ALDH1A1P00352 AC036108.4-201ENST00000611654 2516 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 RNU4-79P-201ENST00000362764 141 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 Y_RNA.144-201ENST00000363521 113 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 NOX1-203ENST00000372964 661 ntTSL 2 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 RNU6-738P-201ENST00000384531 106 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 MT-TR-201ENST00000387439 65 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 U3.18-201ENST00000390880 216 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ALDH1A1P00352 NCSTNP1-201ENST00000406229 144 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 RANP6-201ENST00000413691 644 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 AL161631.1-201ENST00000417933 486 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 AC097359.1-201ENST00000447946 463 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 AL121578.2-201ENST00000448797 447 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 DDX39BP2-208ENST00000453923 258 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 OR52A4P-201ENST00000472867 958 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 RN7SL751P-201ENST00000473281 284 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 SCARNA6-201ENST00000515982 265 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 IGLVI-42-201ENST00000522485 381 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 ARL2BPP2-201ENST00000550907 489 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 PLEKHA3P1-201ENST00000598554 894 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 AC103881.1-201ENST00000603476 538 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 AC022400.9-201ENST00000623633 273 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ALDH1A1P00352 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 TRIM53BP-201ENST00000532912 1720 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 AC022150.4-201ENST00000598322 2848 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ALDH1A1P00352 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 SAMM50P1-201ENST00000455403 1399 ntBASIC8.22□□□□□ -1.09
ALDH1A1P00352 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ALDH1A1P00352 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
ALDH1A1P00352 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ALDH1A1P00352 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
ALDH1A1P00352 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.21□□□□□ -1.09
ALDH1A1P00352 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
ALDH1A1P00352 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
ALDH1A1P00352 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
ALDH1A1P00352 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
ALDH1A1P00352 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
ALDH1A1P00352 TRIM60P19-201ENST00000452879 1462 ntBASIC8.21□□□□□ -1.09
ALDH1A1P00352 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC8.21□□□□□ -1.09
ALDH1A1P00352 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
ALDH1A1P00352 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
ALDH1A1P00352 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.21□□□□□ -1.09
ALDH1A1P00352 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
ALDH1A1P00352 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
ALDH1A1P00352 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ALDH1A1P00352 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.21□□□□□ -1.1
ALDH1A1P00352 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ALDH1A1P00352 AC000367.1-201ENST00000452711 1766 ntBASIC8.21□□□□□ -1.1
ALDH1A1P00352 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ALDH1A1P00352 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ALDH1A1P00352 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ALDH1A1P00352 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
ALDH1A1P00352 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
ALDH1A1P00352 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
ALDH1A1P00352 RNA5SP85-201ENST00000365378 119 ntBASIC8.21□□□□□ -1.1
ALDH1A1P00352 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ALDH1A1P00352 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
ALDH1A1P00352 TAF9BP1-201ENST00000396646 746 ntBASIC8.21□□□□□ -1.1
ALDH1A1P00352 AL359715.1-201ENST00000404330 555 ntBASIC8.21□□□□□ -1.1
ALDH1A1P00352 XKRYP4-201ENST00000414395 483 ntBASIC8.21□□□□□ -1.1
ALDH1A1P00352 RPL36P1-201ENST00000419720 225 ntBASIC8.21□□□□□ -1.1
ALDH1A1P00352 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC8.21□□□□□ -1.1
ALDH1A1P00352 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ALDH1A1P00352 TMX2P1-201ENST00000436507 708 ntBASIC8.21□□□□□ -1.1
ALDH1A1P00352 XKRYP5-201ENST00000449659 483 ntBASIC8.21□□□□□ -1.1
ALDH1A1P00352 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.21□□□□□ -1.1
ALDH1A1P00352 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms