RNA–Protein interactions for RNA: ENST00000455403.1

SAMM50P1-201, Transcript of SAMM50 sorting and assembly machinery component pseudogene 1, humanhuman

BASIC

Gene SAMM50P1, Length 1,399 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50P1-201ENST00000455403 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
SAMM50P1-201ENST00000455403 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
SAMM50P1-201ENST00000455403 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
SAMM50P1-201ENST00000455403 SENP3Q9H4L4 574 aaPredicted RBP18.15■□□□□ 0.5
SAMM50P1-201ENST00000455403 PLPPR3Q6T4P5 718 aa17.11■□□□□ 0.33
SAMM50P1-201ENST00000455403 FOXD1Q16676 465 aa16.79■□□□□ 0.28
SAMM50P1-201ENST00000455403 PPP6R1Q9UPN7 881 aa16.24■□□□□ 0.19
SAMM50P1-201ENST00000455403 ADRA2BP18089 450 aa16.21■□□□□ 0.19
SAMM50P1-201ENST00000455403 PIAS4Q8N2W9 510 aaPredicted RBP15.87■□□□□ 0.13
SAMM50P1-201ENST00000455403 MSH5O43196 834 aa15.48■□□□□ 0.07
SAMM50P1-201ENST00000455403 POTEDQ86YR6 584 aa15.38■□□□□ 0.05
SAMM50P1-201ENST00000455403 PPP4R3CPQ6ZMV5 832 aa15.07■□□□□ 0
SAMM50P1-201ENST00000455403 SCAF1Q9H7N4 1312 aaKnown RBP14.87□□□□□ -0.03
SAMM50P1-201ENST00000455403 KCNA4P22459 653 aa14.85□□□□□ -0.03
SAMM50P1-201ENST00000455403 NCBP3Q53F19 620 aaKnown RBP14.71□□□□□ -0.06
SAMM50P1-201ENST00000455403 MAPK8IP2Q13387 824 aaPredicted RBP14.66□□□□□ -0.06
SAMM50P1-201ENST00000455403 CNKSR2Q8WXI2 1034 aa14.64□□□□□ -0.07
SAMM50P1-201ENST00000455403 NPM3O75607 178 aaKnown RBP14.5□□□□□ -0.09
SAMM50P1-201ENST00000455403 DMRT2Q9Y5R5 561 aa14.5□□□□□ -0.09
SAMM50P1-201ENST00000455403 EHMT2Q96KQ7 1210 aa14.39□□□□□ -0.11
SAMM50P1-201ENST00000455403 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
SAMM50P1-201ENST00000455403 HOXD11P31277 338 aaPredicted RBP14.27□□□□□ -0.12
SAMM50P1-201ENST00000455403 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
SAMM50P1-201ENST00000455403 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
SAMM50P1-201ENST00000455403 DCAF8L1A6NGE4 600 aa13.77□□□□□ -0.21
SAMM50P1-201ENST00000455403 CSRNP3Q8WYN3 585 aa13.77□□□□□ -0.21
SAMM50P1-201ENST00000455403 ZBTB22O15209 634 aa13.69□□□□□ -0.22
SAMM50P1-201ENST00000455403 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
SAMM50P1-201ENST00000455403 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
SAMM50P1-201ENST00000455403 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.52□□□□□ -0.25
SAMM50P1-201ENST00000455403 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
SAMM50P1-201ENST00000455403 U3KPZ7 1027 aaPredicted RBP13.36□□□□□ -0.27
SAMM50P1-201ENST00000455403 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
SAMM50P1-201ENST00000455403 RNF39Q9H2S5 420 aa13.27□□□□□ -0.29
SAMM50P1-201ENST00000455403 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
SAMM50P1-201ENST00000455403 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
SAMM50P1-201ENST00000455403 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
SAMM50P1-201ENST00000455403 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
SAMM50P1-201ENST00000455403 SLC24A1O60721 1099 aa13.18□□□□□ -0.3
SAMM50P1-201ENST00000455403 C1QBPQ07021 282 aaKnown RBP13.12□□□□□ -0.31
SAMM50P1-201ENST00000455403 APLP2Q06481 763 aa13.07□□□□□ -0.32
SAMM50P1-201ENST00000455403 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
SAMM50P1-201ENST00000455403 RTN4Q9NQC3 1192 aaKnown RBP12.97□□□□□ -0.33
SAMM50P1-201ENST00000455403 SPINK5Q9NQ38 1064 aaPredicted RBP12.93□□□□□ -0.34
SAMM50P1-201ENST00000455403 ZNF219Q9P2Y4 722 aaPredicted RBP12.88□□□□□ -0.35
SAMM50P1-201ENST00000455403 CAPN15O75808 1086 aa12.84□□□□□ -0.35
SAMM50P1-201ENST00000455403 AMER1Q5JTC6 1135 aaPredicted RBP12.84□□□□□ -0.35
SAMM50P1-201ENST00000455403 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
SAMM50P1-201ENST00000455403 DSG3P32926 999 aa12.66□□□□□ -0.38
SAMM50P1-201ENST00000455403 POLA2Q14181 598 aa12.64□□□□□ -0.39
SAMM50P1-201ENST00000455403 ABCB7O75027 752 aa12.61□□□□□ -0.39
SAMM50P1-201ENST00000455403 ZBTB12Q9Y330 459 aaPredicted RBP12.5□□□□□ -0.41
SAMM50P1-201ENST00000455403 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
SAMM50P1-201ENST00000455403 FBLN2P98095 1184 aa12.46□□□□□ -0.41
SAMM50P1-201ENST00000455403 FKBP8Q14318 412 aa12.37□□□□□ -0.43
SAMM50P1-201ENST00000455403 OSCARQ8IYS5 282 aa12.24□□□□□ -0.45
SAMM50P1-201ENST00000455403 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
SAMM50P1-201ENST00000455403 SPDYE2BA6NHP3 402 aa12.17□□□□□ -0.46
SAMM50P1-201ENST00000455403 SPDYE6P0CI01 402 aa12.17□□□□□ -0.46
SAMM50P1-201ENST00000455403 SPDYE2Q495Y8 402 aa12.17□□□□□ -0.46
SAMM50P1-201ENST00000455403 PROM2Q8N271 834 aa12.13□□□□□ -0.47
SAMM50P1-201ENST00000455403 SSUH2Q9Y2M2 353 aa12.11□□□□□ -0.47
SAMM50P1-201ENST00000455403 ZNF692Q9BU19 519 aaPredicted RBP12.09□□□□□ -0.47
SAMM50P1-201ENST00000455403 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
SAMM50P1-201ENST00000455403 POTEHQ6S545 545 aa12.02□□□□□ -0.49
SAMM50P1-201ENST00000455403 AKT1S1Q96B36 256 aa11.94□□□□□ -0.5
SAMM50P1-201ENST00000455403 PABPN1Q86U42 306 aaKnown RBP eCLIP11.93□□□□□ -0.5
SAMM50P1-201ENST00000455403 FBXO3Q9UK99 471 aa11.9□□□□□ -0.5
SAMM50P1-201ENST00000455403 DNAJC5Q9H3Z4 198 aa11.86□□□□□ -0.51
SAMM50P1-201ENST00000455403 PLCB2Q00722 1185 aa11.85□□□□□ -0.51
SAMM50P1-201ENST00000455403 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
SAMM50P1-201ENST00000455403 STAG3Q9UJ98 1225 aa11.79□□□□□ -0.52
SAMM50P1-201ENST00000455403 SPDYE1Q8NFV5 336 aaPredicted RBP11.76□□□□□ -0.53
SAMM50P1-201ENST00000455403 PRKCSHP14314 528 aaPredicted RBP11.74□□□□□ -0.53
SAMM50P1-201ENST00000455403 VASPP50552 380 aaPredicted RBP11.74□□□□□ -0.53
SAMM50P1-201ENST00000455403 HAP1P54257 671 aaPredicted RBP11.7□□□□□ -0.54
SAMM50P1-201ENST00000455403 PITPNM1O00562 1244 aa11.67□□□□□ -0.54
SAMM50P1-201ENST00000455403 CLEC11AQ9Y240 323 aa11.65□□□□□ -0.55
SAMM50P1-201ENST00000455403 BCANQ96GW7 911 aa11.63□□□□□ -0.55
SAMM50P1-201ENST00000455403 TAOK2Q9UL54 1235 aa11.59□□□□□ -0.55
SAMM50P1-201ENST00000455403 PRR29P0C7W0 189 aa11.58□□□□□ -0.56
SAMM50P1-201ENST00000455403 IFNLR1Q8IU57 520 aaPredicted RBP11.57□□□□□ -0.56
SAMM50P1-201ENST00000455403 PLCD3Q8N3E9 789 aa11.55□□□□□ -0.56
SAMM50P1-201ENST00000455403 DCAF8L2P0C7V8 631 aa11.54□□□□□ -0.56
SAMM50P1-201ENST00000455403 MIER1Q8N108 512 aa11.54□□□□□ -0.56
SAMM50P1-201ENST00000455403 PLEKHG5O94827 1062 aa11.52□□□□□ -0.57
SAMM50P1-201ENST00000455403 CHRDL2Q6WN34 429 aa11.5□□□□□ -0.57
SAMM50P1-201ENST00000455403 CREBZFQ9NS37 354 aa11.5□□□□□ -0.57
SAMM50P1-201ENST00000455403 ABCC9O60706 1549 aa11.5□□□□□ -0.57
SAMM50P1-201ENST00000455403 VSIG10Q8N0Z9 540 aa11.48□□□□□ -0.57
SAMM50P1-201ENST00000455403 ZBTB47Q9UFB7 747 aaPredicted RBP11.47□□□□□ -0.57
SAMM50P1-201ENST00000455403 FXR2P51116 673 aaKnown RBP eCLIP11.45□□□□□ -0.58
SAMM50P1-201ENST00000455403 KLHL34Q8N239 644 aa11.43□□□□□ -0.58
SAMM50P1-201ENST00000455403 TPRNQ4KMQ1 711 aa11.42□□□□□ -0.58
SAMM50P1-201ENST00000455403 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
SAMM50P1-201ENST00000455403 SPOCK2Q92563 424 aa11.41□□□□□ -0.58
SAMM50P1-201ENST00000455403 PKD2Q13563 968 aa11.4□□□□□ -0.59
SAMM50P1-201ENST00000455403 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
SAMM50P1-201ENST00000455403 CHADLQ6NUI6 762 aa11.37□□□□□ -0.59
SAMM50P1-201ENST00000455403 KDM2AQ9Y2K7 1162 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms