RNA–Protein interactions for RNA: ENST00000390477.2

TRDC-201, Transcript of T cell receptor delta constant, humanhuman

APPRIS P1 BASIC

Gene TRDC, Length 720 nt, Biotype TR C gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDC-201ENST00000390477 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
TRDC-201ENST00000390477 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
TRDC-201ENST00000390477 PHF23Q9BUL5 403 aaPredicted RBP17.94■□□□□ 0.46
TRDC-201ENST00000390477 SENP3Q9H4L4 574 aaPredicted RBP17.66■□□□□ 0.42
TRDC-201ENST00000390477 PLPPR3Q6T4P5 718 aa16.73■□□□□ 0.27
TRDC-201ENST00000390477 FOXD1Q16676 465 aa16.31■□□□□ 0.2
TRDC-201ENST00000390477 ADRA2BP18089 450 aa15.85■□□□□ 0.13
TRDC-201ENST00000390477 PPP6R1Q9UPN7 881 aa15.79■□□□□ 0.12
TRDC-201ENST00000390477 PIAS4Q8N2W9 510 aaPredicted RBP15.51■□□□□ 0.07
TRDC-201ENST00000390477 MSH5O43196 834 aa15.05■□□□□ -0
TRDC-201ENST00000390477 KCNA4P22459 653 aa14.97□□□□□ -0.01
TRDC-201ENST00000390477 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
TRDC-201ENST00000390477 PPP4R3CPQ6ZMV5 832 aa14.76□□□□□ -0.05
TRDC-201ENST00000390477 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
TRDC-201ENST00000390477 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
TRDC-201ENST00000390477 SLC4A1APQ9BWU0 796 aaKnown RBP14.39□□□□□ -0.11
TRDC-201ENST00000390477 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.12
TRDC-201ENST00000390477 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
TRDC-201ENST00000390477 CSRNP3Q8WYN3 585 aa14.27□□□□□ -0.13
TRDC-201ENST00000390477 NPM3O75607 178 aaKnown RBP14.17□□□□□ -0.14
TRDC-201ENST00000390477 DMRT2Q9Y5R5 561 aa14.07□□□□□ -0.16
TRDC-201ENST00000390477 POTEDQ86YR6 584 aa14.06□□□□□ -0.16
TRDC-201ENST00000390477 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
TRDC-201ENST00000390477 HOXD11P31277 338 aaPredicted RBP13.81□□□□□ -0.2
TRDC-201ENST00000390477 ZBTB22O15209 634 aa13.78□□□□□ -0.2
TRDC-201ENST00000390477 DCAF8L1A6NGE4 600 aa13.65□□□□□ -0.22
TRDC-201ENST00000390477 DNAJC5BQ9UF47 199 aa13.6□□□□□ -0.23
TRDC-201ENST00000390477 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
TRDC-201ENST00000390477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRDC-201ENST00000390477 SLC4A2P04920 1241 aa13.29□□□□□ -0.28
TRDC-201ENST00000390477 MYCNP04198 464 aaPredicted RBP13.14□□□□□ -0.31
TRDC-201ENST00000390477 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
TRDC-201ENST00000390477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
TRDC-201ENST00000390477 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
TRDC-201ENST00000390477 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
TRDC-201ENST00000390477 SAMD1Q6SPF0 538 aaPredicted RBP12.95□□□□□ -0.34
TRDC-201ENST00000390477 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
TRDC-201ENST00000390477 RTN4Q9NQC3 1192 aaKnown RBP12.93□□□□□ -0.34
TRDC-201ENST00000390477 APLP2Q06481 763 aa12.88□□□□□ -0.35
TRDC-201ENST00000390477 FKBP8Q14318 412 aa12.88□□□□□ -0.35
TRDC-201ENST00000390477 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
TRDC-201ENST00000390477 SLC24A1O60721 1099 aa12.82□□□□□ -0.36
TRDC-201ENST00000390477 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
TRDC-201ENST00000390477 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
TRDC-201ENST00000390477 CAPN15O75808 1086 aa12.67□□□□□ -0.38
TRDC-201ENST00000390477 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
TRDC-201ENST00000390477 NISCHQ9Y2I1 1504 aa12.62□□□□□ -0.39
TRDC-201ENST00000390477 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
TRDC-201ENST00000390477 ZNF219Q9P2Y4 722 aaPredicted RBP12.61□□□□□ -0.39
TRDC-201ENST00000390477 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.41
TRDC-201ENST00000390477 POLA2Q14181 598 aa12.43□□□□□ -0.42
TRDC-201ENST00000390477 ABCB7O75027 752 aa12.4□□□□□ -0.42
TRDC-201ENST00000390477 FBLN2P98095 1184 aa12.32□□□□□ -0.44
TRDC-201ENST00000390477 DSG3P32926 999 aa12.29□□□□□ -0.44
TRDC-201ENST00000390477 ZBTB12Q9Y330 459 aaPredicted RBP12.26□□□□□ -0.45
TRDC-201ENST00000390477 FBXO3Q9UK99 471 aa12.23□□□□□ -0.45
TRDC-201ENST00000390477 SPDYE4A6NLX3 237 aa12.21□□□□□ -0.45
TRDC-201ENST00000390477 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
TRDC-201ENST00000390477 PROM2Q8N271 834 aa12.06□□□□□ -0.48
TRDC-201ENST00000390477 VASPP50552 380 aaPredicted RBP12.04□□□□□ -0.48
TRDC-201ENST00000390477 OSCARQ8IYS5 282 aa11.97□□□□□ -0.49
TRDC-201ENST00000390477 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
TRDC-201ENST00000390477 PLCB2Q00722 1185 aa11.92□□□□□ -0.5
TRDC-201ENST00000390477 IFNLR1Q8IU57 520 aaPredicted RBP11.92□□□□□ -0.5
TRDC-201ENST00000390477 SPDYE2BA6NHP3 402 aa11.9□□□□□ -0.5
TRDC-201ENST00000390477 SPDYE6P0CI01 402 aa11.9□□□□□ -0.5
TRDC-201ENST00000390477 SPDYE2Q495Y8 402 aa11.9□□□□□ -0.5
TRDC-201ENST00000390477 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
TRDC-201ENST00000390477 RBM42Q9BTD8 480 aaKnown RBP11.8□□□□□ -0.52
TRDC-201ENST00000390477 HAP1P54257 671 aaPredicted RBP11.79□□□□□ -0.52
TRDC-201ENST00000390477 PKD2Q13563 968 aa11.78□□□□□ -0.52
TRDC-201ENST00000390477 PABPN1Q86U42 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRDC-201ENST00000390477 SSUH2Q9Y2M2 353 aa11.74□□□□□ -0.53
TRDC-201ENST00000390477 KLHL34Q8N239 644 aa11.71□□□□□ -0.53
TRDC-201ENST00000390477 SPOCK2Q92563 424 aa11.68□□□□□ -0.54
TRDC-201ENST00000390477 AKT1S1Q96B36 256 aa11.65□□□□□ -0.54
TRDC-201ENST00000390477 STAG3Q9UJ98 1225 aa11.63□□□□□ -0.55
TRDC-201ENST00000390477 ECM2O94769 699 aaPredicted RBP11.62□□□□□ -0.55
TRDC-201ENST00000390477 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
TRDC-201ENST00000390477 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
TRDC-201ENST00000390477 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.59□□□□□ -0.55
TRDC-201ENST00000390477 BCANQ96GW7 911 aa11.58□□□□□ -0.56
TRDC-201ENST00000390477 BBXQ8WY36 941 aaPredicted RBP11.56□□□□□ -0.56
TRDC-201ENST00000390477 CLEC11AQ9Y240 323 aa11.55□□□□□ -0.56
TRDC-201ENST00000390477 SPDYE1Q8NFV5 336 aaPredicted RBP11.54□□□□□ -0.56
TRDC-201ENST00000390477 REM2Q8IYK8 340 aaPredicted RBP11.53□□□□□ -0.56
TRDC-201ENST00000390477 MIER1Q8N108 512 aa11.53□□□□□ -0.56
TRDC-201ENST00000390477 PLEKHG5O94827 1062 aa11.5□□□□□ -0.57
TRDC-201ENST00000390477 NPM1P06748 294 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRDC-201ENST00000390477 PAXIP1Q6ZW49 1069 aaPredicted RBP11.49□□□□□ -0.57
TRDC-201ENST00000390477 CFAP44Q96MT7 982 aa11.47□□□□□ -0.57
TRDC-201ENST00000390477 RGL2O15211 777 aa11.46□□□□□ -0.57
TRDC-201ENST00000390477 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
TRDC-201ENST00000390477 KDM2AQ9Y2K7 1162 aa11.42□□□□□ -0.58
TRDC-201ENST00000390477 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
TRDC-201ENST00000390477 TAOK2Q9UL54 1235 aa11.4□□□□□ -0.58
TRDC-201ENST00000390477 PRKCSHP14314 528 aaPredicted RBP11.39□□□□□ -0.59
TRDC-201ENST00000390477 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
TRDC-201ENST00000390477 SPRYD3Q8NCJ5 442 aa11.38□□□□□ -0.59
TRDC-201ENST00000390477 PITPNM1O00562 1244 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms