Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
USH2AO75445 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC2.34□□□□□ -2.04
USH2AO75445 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC2.34□□□□□ -2.04
USH2AO75445 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC2.34□□□□□ -2.04
USH2AO75445 AC041039.1-201ENST00000485656 536 ntBASIC2.34□□□□□ -2.04
USH2AO75445 AL133372.1-201ENST00000493565 745 ntBASIC2.34□□□□□ -2.04
USH2AO75445 SSX8-201ENST00000506270 579 ntBASIC2.34□□□□□ -2.04
USH2AO75445 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC2.34□□□□□ -2.04
USH2AO75445 OR7E128P-201ENST00000532736 1024 ntBASIC2.34□□□□□ -2.04
USH2AO75445 AC107016.1-201ENST00000550463 337 ntBASIC2.34□□□□□ -2.04
USH2AO75445 IGKV1OR2-9-201ENST00000603957 287 ntBASIC2.34□□□□□ -2.04
USH2AO75445 IGKV1OR2-11-201ENST00000604120 287 ntBASIC2.34□□□□□ -2.04
USH2AO75445 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC2.34□□□□□ -2.04
USH2AO75445 EEF1A1P36-201ENST00000427807 1351 ntBASIC2.34□□□□□ -2.04
USH2AO75445 COL12A1-203ENST00000416123 8964 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 MYO5A-202ENST00000358212 12220 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 MYO5A-206ENST00000399233 12220 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC2.33□□□□□ -2.04
USH2AO75445 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 AC011504.1-201ENST00000623331 4103 ntBASIC2.33□□□□□ -2.04
USH2AO75445 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC2.33□□□□□ -2.04
USH2AO75445 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
USH2AO75445 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 AC096775.1-201ENST00000437724 448 ntBASIC2.33□□□□□ -2.04
USH2AO75445 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 IGHVIII-76-1-201ENST00000523776 286 ntBASIC2.33□□□□□ -2.04
USH2AO75445 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC2.33□□□□□ -2.04
USH2AO75445 AC005377.1-201ENST00000605126 456 ntBASIC2.33□□□□□ -2.04
USH2AO75445 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC2.33□□□□□ -2.04
USH2AO75445 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 AC003973.3-201ENST00000624863 2822 ntBASIC2.33□□□□□ -2.04
USH2AO75445 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC2.33□□□□□ -2.04
USH2AO75445 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC2.33□□□□□ -2.04
USH2AO75445 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
USH2AO75445 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 ASTN1-202ENST00000361833 7116 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 HMGB3P7-201ENST00000400214 611 ntBASIC2.33□□□□□ -2.04
USH2AO75445 MYL6P5-201ENST00000412707 459 ntBASIC2.33□□□□□ -2.04
USH2AO75445 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC2.33□□□□□ -2.04
USH2AO75445 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC2.33□□□□□ -2.04
USH2AO75445 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC2.33□□□□□ -2.04
USH2AO75445 NPM1P6-201ENST00000521088 871 ntBASIC2.33□□□□□ -2.04
USH2AO75445 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC2.33□□□□□ -2.04
USH2AO75445 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC2.33□□□□□ -2.04
USH2AO75445 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 USP9YP3-201ENST00000434481 1766 ntBASIC2.33□□□□□ -2.04
USH2AO75445 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.33□□□□□ -2.04
USH2AO75445 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC2.33□□□□□ -2.04
USH2AO75445 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
USH2AO75445 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC2.33□□□□□ -2.04
USH2AO75445 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 SNORA62.3-201ENST00000365110 153 ntBASIC2.33□□□□□ -2.04
USH2AO75445 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USH2AO75445 AP002530.1-201ENST00000405705 684 ntBASIC2.33□□□□□ -2.04
USH2AO75445 IGKV1-32-201ENST00000519290 311 ntBASIC2.33□□□□□ -2.04
USH2AO75445 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC2.33□□□□□ -2.04
USH2AO75445 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC2.33□□□□□ -2.04
USH2AO75445 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC2.33□□□□□ -2.04
USH2AO75445 AC021106.3-201ENST00000623925 531 ntBASIC2.33□□□□□ -2.04
USH2AO75445 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms