RNA–Protein interactions for RNA: ENST00000531715.5

AP003557.1-201, humanhuman

TSL 3 BASIC

Gene AP003557.1, Length 585 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003557.1-201ENST00000531715 AEBP2Q6ZN18 517 aaPredicted RBP19.54■□□□□ 0.72
AP003557.1-201ENST00000531715 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
AP003557.1-201ENST00000531715 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
AP003557.1-201ENST00000531715 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
AP003557.1-201ENST00000531715 FOXD1Q16676 465 aa15.58■□□□□ 0.08
AP003557.1-201ENST00000531715 PLPPR3Q6T4P5 718 aa14.76□□□□□ -0.05
AP003557.1-201ENST00000531715 MSH5O43196 834 aa14.64□□□□□ -0.07
AP003557.1-201ENST00000531715 PIAS4Q8N2W9 510 aaPredicted RBP14.53□□□□□ -0.08
AP003557.1-201ENST00000531715 PPP6R1Q9UPN7 881 aa14.48□□□□□ -0.09
AP003557.1-201ENST00000531715 ADRA2BP18089 450 aa14.43□□□□□ -0.1
AP003557.1-201ENST00000531715 POTEDQ86YR6 584 aa14.42□□□□□ -0.1
AP003557.1-201ENST00000531715 MAPK8IP2Q13387 824 aaPredicted RBP13.28□□□□□ -0.28
AP003557.1-201ENST00000531715 SCAF1Q9H7N4 1312 aaKnown RBP13.27□□□□□ -0.29
AP003557.1-201ENST00000531715 DMRT2Q9Y5R5 561 aa13.24□□□□□ -0.29
AP003557.1-201ENST00000531715 PPP4R3CPQ6ZMV5 832 aa12.91□□□□□ -0.34
AP003557.1-201ENST00000531715 HOXD11P31277 338 aaPredicted RBP12.73□□□□□ -0.37
AP003557.1-201ENST00000531715 CNKSR2Q8WXI2 1034 aa12.7□□□□□ -0.38
AP003557.1-201ENST00000531715 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
AP003557.1-201ENST00000531715 CACNB1Q02641 598 aaPredicted RBP12.61□□□□□ -0.39
AP003557.1-201ENST00000531715 RNF216Q9NWF9 866 aaPredicted RBP12.61□□□□□ -0.39
AP003557.1-201ENST00000531715 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
AP003557.1-201ENST00000531715 NCBP3Q53F19 620 aaKnown RBP12.41□□□□□ -0.42
AP003557.1-201ENST00000531715 DNAJC5BQ9UF47 199 aa12.35□□□□□ -0.43
AP003557.1-201ENST00000531715 C1QBPQ07021 282 aaKnown RBP12.31□□□□□ -0.44
AP003557.1-201ENST00000531715 NISCHQ9Y2I1 1504 aa12.26□□□□□ -0.45
AP003557.1-201ENST00000531715 NPM3O75607 178 aaKnown RBP12.2□□□□□ -0.46
AP003557.1-201ENST00000531715 KCNA4P22459 653 aa12.15□□□□□ -0.46
AP003557.1-201ENST00000531715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.12□□□□□ -0.47
AP003557.1-201ENST00000531715 U3KPZ7 1027 aaPredicted RBP11.84□□□□□ -0.51
AP003557.1-201ENST00000531715 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
AP003557.1-201ENST00000531715 CAPN15O75808 1086 aa11.69□□□□□ -0.54
AP003557.1-201ENST00000531715 SPINK5Q9NQ38 1064 aaPredicted RBP11.68□□□□□ -0.54
AP003557.1-201ENST00000531715 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
AP003557.1-201ENST00000531715 DSG3P32926 999 aa11.65□□□□□ -0.54
AP003557.1-201ENST00000531715 SLC4A1APQ9BWU0 796 aaKnown RBP11.61□□□□□ -0.55
AP003557.1-201ENST00000531715 APLP2Q06481 763 aa11.56□□□□□ -0.56
AP003557.1-201ENST00000531715 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.52□□□□□ -0.57
AP003557.1-201ENST00000531715 HNRNPUL2Q1KMD3 747 aaKnown RBP11.52□□□□□ -0.57
AP003557.1-201ENST00000531715 TRHP20396 242 aaPredicted RBP11.47□□□□□ -0.57
AP003557.1-201ENST00000531715 ZNF219Q9P2Y4 722 aaPredicted RBP11.47□□□□□ -0.57
AP003557.1-201ENST00000531715 CSRNP3Q8WYN3 585 aa11.46□□□□□ -0.57
AP003557.1-201ENST00000531715 SAMD1Q6SPF0 538 aaPredicted RBP11.43□□□□□ -0.58
AP003557.1-201ENST00000531715 ABCB7O75027 752 aa11.38□□□□□ -0.59
AP003557.1-201ENST00000531715 MYCNP04198 464 aaPredicted RBP11.3□□□□□ -0.6
AP003557.1-201ENST00000531715 POTEHQ6S545 545 aa11.29□□□□□ -0.6
AP003557.1-201ENST00000531715 ZBTB22O15209 634 aa11.23□□□□□ -0.61
AP003557.1-201ENST00000531715 POLA2Q14181 598 aa11.15□□□□□ -0.62
AP003557.1-201ENST00000531715 RBM42Q9BTD8 480 aaKnown RBP11.14□□□□□ -0.63
AP003557.1-201ENST00000531715 FOXD4L1Q9NU39 408 aa11.12□□□□□ -0.63
AP003557.1-201ENST00000531715 ATF5Q9Y2D1 282 aaPredicted RBP11.01□□□□□ -0.65
AP003557.1-201ENST00000531715 CCDC180Q9P1Z9 1646 aa10.98□□□□□ -0.65
AP003557.1-201ENST00000531715 ZBTB12Q9Y330 459 aaPredicted RBP10.95□□□□□ -0.66
AP003557.1-201ENST00000531715 CHRDL2Q6WN34 429 aa10.9□□□□□ -0.66
AP003557.1-201ENST00000531715 AKT1S1Q96B36 256 aa10.86□□□□□ -0.67
AP003557.1-201ENST00000531715 ATXN8OSP0DMR3 200 aa10.82□□□□□ -0.68
AP003557.1-201ENST00000531715 OSCARQ8IYS5 282 aa10.77□□□□□ -0.69
AP003557.1-201ENST00000531715 REM2Q8IYK8 340 aaPredicted RBP10.74□□□□□ -0.69
AP003557.1-201ENST00000531715 FBLN2P98095 1184 aa10.63□□□□□ -0.71
AP003557.1-201ENST00000531715 PIP4P2Q8N4L2 257 aa10.62□□□□□ -0.71
AP003557.1-201ENST00000531715 PITPNM1O00562 1244 aa10.61□□□□□ -0.71
AP003557.1-201ENST00000531715 SPDYE2BA6NHP3 402 aa10.59□□□□□ -0.71
AP003557.1-201ENST00000531715 SPDYE6P0CI01 402 aa10.59□□□□□ -0.71
AP003557.1-201ENST00000531715 SPDYE2Q495Y8 402 aa10.59□□□□□ -0.71
AP003557.1-201ENST00000531715 FXR2P51116 673 aaKnown RBP eCLIP10.56□□□□□ -0.72
AP003557.1-201ENST00000531715 SP7Q8TDD2 431 aaPredicted RBP10.54□□□□□ -0.72
AP003557.1-201ENST00000531715 ABCC9O60706 1549 aa10.53□□□□□ -0.72
AP003557.1-201ENST00000531715 MKRN4PQ13434 485 aaPredicted RBP10.5□□□□□ -0.73
AP003557.1-201ENST00000531715 HAX1O00165 279 aa10.47□□□□□ -0.73
AP003557.1-201ENST00000531715 ZNF692Q9BU19 519 aaPredicted RBP10.45□□□□□ -0.74
AP003557.1-201ENST00000531715 SPDYE1Q8NFV5 336 aaPredicted RBP10.43□□□□□ -0.74
AP003557.1-201ENST00000531715 SSUH2Q9Y2M2 353 aa10.42□□□□□ -0.74
AP003557.1-201ENST00000531715 CLEC11AQ9Y240 323 aa10.4□□□□□ -0.74
AP003557.1-201ENST00000531715 PRKAR2AP13861 404 aaKnown RBP10.35□□□□□ -0.75
AP003557.1-201ENST00000531715 EVX2Q03828 476 aa10.31□□□□□ -0.76
AP003557.1-201ENST00000531715 FKBP8Q14318 412 aa10.31□□□□□ -0.76
AP003557.1-201ENST00000531715 PABPN1Q86U42 306 aaKnown RBP eCLIP10.27□□□□□ -0.77
AP003557.1-201ENST00000531715 NACADO15069 1562 aa10.26□□□□□ -0.77
AP003557.1-201ENST00000531715 RB1CC1Q8TDY2 1594 aa10.26□□□□□ -0.77
AP003557.1-201ENST00000531715 ZCCHC6Q5VYS8 1495 aaKnown RBP10.25□□□□□ -0.77
AP003557.1-201ENST00000531715 MYO15BQ96JP2 1530 aa10.23□□□□□ -0.77
AP003557.1-201ENST00000531715 PRR29P0C7W0 189 aa10.23□□□□□ -0.77
AP003557.1-201ENST00000531715 C19orf67A6NJJ6 358 aa10.22□□□□□ -0.77
AP003557.1-201ENST00000531715 DCAF1Q9Y4B6 1507 aa10.21□□□□□ -0.78
AP003557.1-201ENST00000531715 CHADLQ6NUI6 762 aa10.19□□□□□ -0.78
AP003557.1-201ENST00000531715 RTN4Q9NQC3 1192 aaKnown RBP10.13□□□□□ -0.79
AP003557.1-201ENST00000531715 AMER1Q5JTC6 1135 aaPredicted RBP10.1□□□□□ -0.79
AP003557.1-201ENST00000531715 GABBR2O75899 941 aa10.09□□□□□ -0.79
AP003557.1-201ENST00000531715 DCAF8L2P0C7V8 631 aa10.07□□□□□ -0.8
AP003557.1-201ENST00000531715 FARP1Q9Y4F1 1045 aaPredicted RBP10.06□□□□□ -0.8
AP003557.1-201ENST00000531715 UNC13AQ9UPW8 1703 aa10.03□□□□□ -0.8
AP003557.1-201ENST00000531715 STAG3Q9UJ98 1225 aa10.02□□□□□ -0.81
AP003557.1-201ENST00000531715 CD44P16070 742 aaKnown RBP10.01□□□□□ -0.81
AP003557.1-201ENST00000531715 SPDYE4A6NLX3 237 aa9.98□□□□□ -0.81
AP003557.1-201ENST00000531715 CLCN6P51797 869 aa9.96□□□□□ -0.82
AP003557.1-201ENST00000531715 CREBZFQ9NS37 354 aa9.94□□□□□ -0.82
AP003557.1-201ENST00000531715 SCRIBQ14160 1630 aa9.93□□□□□ -0.82
AP003557.1-201ENST00000531715 SHROOM4Q9ULL8 1493 aa9.91□□□□□ -0.82
AP003557.1-201ENST00000531715 LHX8Q68G74 356 aa9.9□□□□□ -0.82
AP003557.1-201ENST00000531715 BICRAQ9NZM4 1560 aa9.88□□□□□ -0.83
AP003557.1-201ENST00000531715 ZRANB1Q9UGI0 708 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms