Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HPS1Q92902 RBPJP7-201ENST00000442803 1447 ntBASIC7.43□□□□□ -1.22
HPS1Q92902 RBPJP5-201ENST00000449433 1447 ntBASIC7.43□□□□□ -1.22
HPS1Q92902 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.43□□□□□ -1.22
HPS1Q92902 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC7.43□□□□□ -1.22
HPS1Q92902 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HPS1Q92902 NMD3P1-201ENST00000439704 1488 ntBASIC7.43□□□□□ -1.22
HPS1Q92902 AC217777.1-201ENST00000570034 1471 ntBASIC7.43□□□□□ -1.22
HPS1Q92902 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.43□□□□□ -1.22
HPS1Q92902 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC7.42□□□□□ -1.22
HPS1Q92902 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC7.42□□□□□ -1.22
HPS1Q92902 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 ASNSP6-201ENST00000592770 1618 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.42□□□□□ -1.22
HPS1Q92902 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.42□□□□□ -1.22
HPS1Q92902 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC7.42□□□□□ -1.22
HPS1Q92902 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC7.42□□□□□ -1.22
HPS1Q92902 Y_RNA.197-201ENST00000364004 102 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 RPL10P10-201ENST00000403509 664 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 RNU6-195P-201ENST00000411352 109 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 OFD1P1Y-201ENST00000411756 1225 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC7.42□□□□□ -1.22
HPS1Q92902 NENFP1-201ENST00000419476 466 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 ISCA1P6-201ENST00000427740 390 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC7.42□□□□□ -1.22
HPS1Q92902 AL450311.1-201ENST00000434931 576 ntTSL 4 BASIC7.42□□□□□ -1.22
HPS1Q92902 LSM3P3-201ENST00000436601 306 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
HPS1Q92902 AP1B1P1-202ENST00000448124 191 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 AC104634.1-201ENST00000452720 462 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 AC091685.2-201ENST00000454924 864 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 IFNA22P-201ENST00000458710 570 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 RN7SL223P-201ENST00000470401 294 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 RN7SL448P-201ENST00000475566 295 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 AL928654.1-201ENST00000476081 354 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 RN7SL685P-201ENST00000476271 298 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 AC099521.1-201ENST00000482557 334 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
HPS1Q92902 HMGB1P30-201ENST00000492455 606 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC7.42□□□□□ -1.22
HPS1Q92902 GAPDHP35-201ENST00000513369 976 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 ALG1L12P-201ENST00000515046 434 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC7.42□□□□□ -1.22
HPS1Q92902 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.42□□□□□ -1.22
HPS1Q92902 AP003467.2-201ENST00000520175 319 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC7.42□□□□□ -1.22
HPS1Q92902 ATP6V1G1P2-201ENST00000522436 346 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.42□□□□□ -1.22
HPS1Q92902 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.42□□□□□ -1.22
HPS1Q92902 SNRPGP18-201ENST00000553000 214 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 SCOCP1-201ENST00000554676 349 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.42□□□□□ -1.22
HPS1Q92902 AC104261.1-201ENST00000560203 392 ntTSL 3 BASIC7.42□□□□□ -1.22
HPS1Q92902 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC7.42□□□□□ -1.22
HPS1Q92902 AC006120.1-201ENST00000579375 546 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 PDLIM1P3-201ENST00000582370 599 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.42□□□□□ -1.22
HPS1Q92902 RN7SL246P-201ENST00000584467 296 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 TBX18-AS1-208ENST00000591225 762 ntTSL 5 BASIC7.42□□□□□ -1.22
HPS1Q92902 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.42□□□□□ -1.22
HPS1Q92902 Metazoa_SRP.44-201ENST00000615037 294 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 AC069542.2-201ENST00000624816 216 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 RBMS3-AS2-207ENST00000629416 456 ntTSL 5 BASIC7.42□□□□□ -1.22
HPS1Q92902 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC7.42□□□□□ -1.22
HPS1Q92902 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
HPS1Q92902 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.42□□□□□ -1.22
HPS1Q92902 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.42□□□□□ -1.22
HPS1Q92902 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC7.42□□□□□ -1.22
HPS1Q92902 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.42□□□□□ -1.22
HPS1Q92902 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HPS1Q92902 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
HPS1Q92902 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HPS1Q92902 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HPS1Q92902 AC037487.1-201ENST00000583416 2474 ntTSL 5 BASIC7.41□□□□□ -1.22
HPS1Q92902 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC7.41□□□□□ -1.22
HPS1Q92902 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.41□□□□□ -1.22
HPS1Q92902 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HPS1Q92902 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
HPS1Q92902 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HPS1Q92902 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms