RNA–Protein interactions for RNA: ENST00000439704.1

NMD3P1-201, Transcript of NMD3 ribosome export adaptor pseudogene 1, humanhuman

BASIC

Gene NMD3P1, Length 1,488 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3P1-201ENST00000439704 AEBP2Q6ZN18 517 aaPredicted RBP19.93■□□□□ 0.78
NMD3P1-201ENST00000439704 CHIC1Q5VXU3 224 aa19.35■□□□□ 0.69
NMD3P1-201ENST00000439704 SENP3Q9H4L4 574 aaPredicted RBP17■□□□□ 0.31
NMD3P1-201ENST00000439704 PHF23Q9BUL5 403 aaPredicted RBP16.98■□□□□ 0.31
NMD3P1-201ENST00000439704 FOXD1Q16676 465 aa15.77■□□□□ 0.11
NMD3P1-201ENST00000439704 PLPPR3Q6T4P5 718 aa15.66■□□□□ 0.1
NMD3P1-201ENST00000439704 PPP6R1Q9UPN7 881 aa15.04■□□□□ -0
NMD3P1-201ENST00000439704 ADRA2BP18089 450 aa15.01□□□□□ -0.01
NMD3P1-201ENST00000439704 PIAS4Q8N2W9 510 aaPredicted RBP14.82□□□□□ -0.04
NMD3P1-201ENST00000439704 MSH5O43196 834 aa14.64□□□□□ -0.07
NMD3P1-201ENST00000439704 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
NMD3P1-201ENST00000439704 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
NMD3P1-201ENST00000439704 MAPK8IP2Q13387 824 aaPredicted RBP13.67□□□□□ -0.22
NMD3P1-201ENST00000439704 POTEDQ86YR6 584 aa13.57□□□□□ -0.24
NMD3P1-201ENST00000439704 DMRT2Q9Y5R5 561 aa13.54□□□□□ -0.24
NMD3P1-201ENST00000439704 CNKSR2Q8WXI2 1034 aa13.43□□□□□ -0.26
NMD3P1-201ENST00000439704 NCBP3Q53F19 620 aaKnown RBP13.4□□□□□ -0.26
NMD3P1-201ENST00000439704 KCNA4P22459 653 aa13.23□□□□□ -0.29
NMD3P1-201ENST00000439704 RNF216Q9NWF9 866 aaPredicted RBP13.22□□□□□ -0.29
NMD3P1-201ENST00000439704 HOXD11P31277 338 aaPredicted RBP13.2□□□□□ -0.3
NMD3P1-201ENST00000439704 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.3
NMD3P1-201ENST00000439704 DCAF8L1A6NGE4 600 aa12.93□□□□□ -0.34
NMD3P1-201ENST00000439704 DNAJC5BQ9UF47 199 aa12.86□□□□□ -0.35
NMD3P1-201ENST00000439704 SLC4A1APQ9BWU0 796 aaKnown RBP12.59□□□□□ -0.39
NMD3P1-201ENST00000439704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.57□□□□□ -0.4
NMD3P1-201ENST00000439704 RNF39Q9H2S5 420 aa12.52□□□□□ -0.41
NMD3P1-201ENST00000439704 SLC4A2P04920 1241 aa12.45□□□□□ -0.42
NMD3P1-201ENST00000439704 C1QBPQ07021 282 aaKnown RBP12.39□□□□□ -0.43
NMD3P1-201ENST00000439704 U3KPZ7 1027 aaPredicted RBP12.33□□□□□ -0.44
NMD3P1-201ENST00000439704 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
NMD3P1-201ENST00000439704 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
NMD3P1-201ENST00000439704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.19□□□□□ -0.46
NMD3P1-201ENST00000439704 HNRNPUL2Q1KMD3 747 aaKnown RBP12.19□□□□□ -0.46
NMD3P1-201ENST00000439704 MYCNP04198 464 aaPredicted RBP12.17□□□□□ -0.46
NMD3P1-201ENST00000439704 ZBTB22O15209 634 aa12.15□□□□□ -0.46
NMD3P1-201ENST00000439704 SAMD1Q6SPF0 538 aaPredicted RBP12.11□□□□□ -0.47
NMD3P1-201ENST00000439704 APLP2Q06481 763 aa12.1□□□□□ -0.47
NMD3P1-201ENST00000439704 SPINK5Q9NQ38 1064 aaPredicted RBP12.02□□□□□ -0.49
NMD3P1-201ENST00000439704 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
NMD3P1-201ENST00000439704 CAPN15O75808 1086 aa12□□□□□ -0.49
NMD3P1-201ENST00000439704 CSRNP3Q8WYN3 585 aa11.99□□□□□ -0.49
NMD3P1-201ENST00000439704 ZNF219Q9P2Y4 722 aaPredicted RBP11.92□□□□□ -0.5
NMD3P1-201ENST00000439704 TRHP20396 242 aaPredicted RBP11.9□□□□□ -0.5
NMD3P1-201ENST00000439704 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
NMD3P1-201ENST00000439704 DSG3P32926 999 aa11.84□□□□□ -0.51
NMD3P1-201ENST00000439704 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
NMD3P1-201ENST00000439704 ABCB7O75027 752 aa11.72□□□□□ -0.53
NMD3P1-201ENST00000439704 POLA2Q14181 598 aa11.7□□□□□ -0.54
NMD3P1-201ENST00000439704 ZBTB12Q9Y330 459 aaPredicted RBP11.52□□□□□ -0.56
NMD3P1-201ENST00000439704 FBLN2P98095 1184 aa11.39□□□□□ -0.59
NMD3P1-201ENST00000439704 RBM42Q9BTD8 480 aaKnown RBP11.32□□□□□ -0.6
NMD3P1-201ENST00000439704 MKRN4PQ13434 485 aaPredicted RBP11.31□□□□□ -0.6
NMD3P1-201ENST00000439704 OSCARQ8IYS5 282 aa11.25□□□□□ -0.61
NMD3P1-201ENST00000439704 SPDYE2BA6NHP3 402 aa11.18□□□□□ -0.62
NMD3P1-201ENST00000439704 SPDYE6P0CI01 402 aa11.18□□□□□ -0.62
NMD3P1-201ENST00000439704 SPDYE2Q495Y8 402 aa11.18□□□□□ -0.62
NMD3P1-201ENST00000439704 AKT1S1Q96B36 256 aa11.14□□□□□ -0.63
NMD3P1-201ENST00000439704 ZNF692Q9BU19 519 aaPredicted RBP11.11□□□□□ -0.63
NMD3P1-201ENST00000439704 SSUH2Q9Y2M2 353 aa11.06□□□□□ -0.64
NMD3P1-201ENST00000439704 REM2Q8IYK8 340 aaPredicted RBP11.02□□□□□ -0.65
NMD3P1-201ENST00000439704 SPDYE4A6NLX3 237 aa11□□□□□ -0.65
NMD3P1-201ENST00000439704 PABPN1Q86U42 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
NMD3P1-201ENST00000439704 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
NMD3P1-201ENST00000439704 SPDYE1Q8NFV5 336 aaPredicted RBP10.88□□□□□ -0.67
NMD3P1-201ENST00000439704 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
NMD3P1-201ENST00000439704 FKBP8Q14318 412 aa10.83□□□□□ -0.68
NMD3P1-201ENST00000439704 CLEC11AQ9Y240 323 aa10.81□□□□□ -0.68
NMD3P1-201ENST00000439704 PROM2Q8N271 834 aa10.8□□□□□ -0.68
NMD3P1-201ENST00000439704 STAG3Q9UJ98 1225 aa10.77□□□□□ -0.69
NMD3P1-201ENST00000439704 PRR29P0C7W0 189 aa10.73□□□□□ -0.69
NMD3P1-201ENST00000439704 POTEHQ6S545 545 aa10.73□□□□□ -0.69
NMD3P1-201ENST00000439704 FXR2P51116 673 aaKnown RBP eCLIP10.72□□□□□ -0.69
NMD3P1-201ENST00000439704 PIP4P2Q8N4L2 257 aa10.71□□□□□ -0.69
NMD3P1-201ENST00000439704 PRKAR2AP13861 404 aaKnown RBP10.61□□□□□ -0.71
NMD3P1-201ENST00000439704 FBXO3Q9UK99 471 aa10.56□□□□□ -0.72
NMD3P1-201ENST00000439704 CHADLQ6NUI6 762 aa10.55□□□□□ -0.72
NMD3P1-201ENST00000439704 CREBZFQ9NS37 354 aa10.53□□□□□ -0.72
NMD3P1-201ENST00000439704 FARP1Q9Y4F1 1045 aaPredicted RBP10.48□□□□□ -0.73
NMD3P1-201ENST00000439704 MIER1Q8N108 512 aa10.47□□□□□ -0.73
NMD3P1-201ENST00000439704 PLEKHG5O94827 1062 aa10.45□□□□□ -0.74
NMD3P1-201ENST00000439704 HAX1O00165 279 aa10.42□□□□□ -0.74
NMD3P1-201ENST00000439704 PLCD3Q8N3E9 789 aa10.42□□□□□ -0.74
NMD3P1-201ENST00000439704 MNX1P50219 401 aaPredicted RBP10.4□□□□□ -0.74
NMD3P1-201ENST00000439704 NPM1P06748 294 aaKnown RBP eCLIP10.39□□□□□ -0.75
NMD3P1-201ENST00000439704 C19orf67A6NJJ6 358 aa10.36□□□□□ -0.75
NMD3P1-201ENST00000439704 VASPP50552 380 aaPredicted RBP10.36□□□□□ -0.75
NMD3P1-201ENST00000439704 ZBTB47Q9UFB7 747 aaPredicted RBP10.36□□□□□ -0.75
NMD3P1-201ENST00000439704 EVX2Q03828 476 aa10.3□□□□□ -0.76
NMD3P1-201ENST00000439704 CD44P16070 742 aaKnown RBP10.29□□□□□ -0.76
NMD3P1-201ENST00000439704 KLHL34Q8N239 644 aa10.25□□□□□ -0.77
NMD3P1-201ENST00000439704 PAK3O75914 559 aaPredicted RBP10.24□□□□□ -0.77
NMD3P1-201ENST00000439704 SP7Q8TDD2 431 aaPredicted RBP10.24□□□□□ -0.77
NMD3P1-201ENST00000439704 IFNLR1Q8IU57 520 aaPredicted RBP10.22□□□□□ -0.77
NMD3P1-201ENST00000439704 ZRANB1Q9UGI0 708 aa10.21□□□□□ -0.78
NMD3P1-201ENST00000439704 NUBP1P53384 320 aa10.2□□□□□ -0.78
NMD3P1-201ENST00000439704 RASEFQ8IZ41 740 aa10.17□□□□□ -0.78
NMD3P1-201ENST00000439704 CLCN6P51797 869 aa10.17□□□□□ -0.78
NMD3P1-201ENST00000439704 TSPYL2Q9H2G4 693 aaPredicted RBP10.17□□□□□ -0.78
NMD3P1-201ENST00000439704 ZNF579Q8NAF0 562 aaKnown RBP10.16□□□□□ -0.78
NMD3P1-201ENST00000439704 SPOCK2Q92563 424 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms