Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 SIMC1-201ENST00000332772 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC131649.2-201ENST00000624925 4439 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AL353807.3-201ENST00000500626 2505 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 OR11H4-201ENST00000315409 1082 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 SNORA62.2-201ENST00000364672 152 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 MIR320C1-201ENST00000408566 88 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 RPL35AP12-201ENST00000425362 338 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 OR2B7P-201ENST00000429302 934 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 AL356121.1-201ENST00000442911 156 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 HNRNPDLP3-201ENST00000456745 380 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC018638.3-201ENST00000461273 132 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 RPSAP48-201ENST00000466509 889 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC017015.1-201ENST00000477387 286 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC104063.1-201ENST00000504840 702 ntTSL 3 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 Y_RNA.672-201ENST00000516289 104 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC044836.1-201ENST00000519514 274 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 IGLVVI-25-1-201ENST00000521893 249 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 AP000790.1-201ENST00000528891 737 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 FAM30C-201ENST00000561158 410 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC055876.1-202ENST00000567053 138 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 SNORD39.2-201ENST00000579995 76 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 MIR544B-201ENST00000582372 78 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 RNF157-207ENST00000592271 755 ntTSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 RMST_3.1-201ENST00000611651 109 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC068722.2-201ENST00000618734 544 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC018926.3-201ENST00000618841 406 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC009268.2-201ENST00000621925 457 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC138649.5-201ENST00000637456 137 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 NXF5-205ENST00000473265 1348 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC122688.4-201ENST00000623279 4394 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC092681.2-201ENST00000565102 3044 ntTSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 CAB39-207ENST00000614925 1619 ntTSL 5 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 AC025574.1-201ENST00000554784 1653 ntBASIC8.17□□□□□ -1.1
PHOX2BQ99453 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 RPE-216ENST00000454822 2130 ntTSL 2 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.17□□□□□ -1.1
PHOX2BQ99453 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PHOX2BQ99453 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
PHOX2BQ99453 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
PHOX2BQ99453 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PHOX2BQ99453 FGF5-201ENST00000312465 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PHOX2BQ99453 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
PHOX2BQ99453 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PHOX2BQ99453 OR52B1P-201ENST00000316506 909 ntBASIC8.16□□□□□ -1.1
PHOX2BQ99453 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PHOX2BQ99453 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC8.16□□□□□ -1.1
PHOX2BQ99453 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PHOX2BQ99453 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PHOX2BQ99453 RN7SKP211-201ENST00000363328 315 ntBASIC8.16□□□□□ -1.1
PHOX2BQ99453 RNU6-254P-201ENST00000363377 107 ntBASIC8.16□□□□□ -1.1
PHOX2BQ99453 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PHOX2BQ99453 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms