Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC8.17□□□□□ -1.1
SCUBE3Q8IX30 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
SCUBE3Q8IX30 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SCUBE3Q8IX30 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.17□□□□□ -1.1
SCUBE3Q8IX30 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
SCUBE3Q8IX30 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SCUBE3Q8IX30 FARSBP1-201ENST00000435808 1778 ntBASIC8.17□□□□□ -1.1
SCUBE3Q8IX30 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SCUBE3Q8IX30 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SCUBE3Q8IX30 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC8.17□□□□□ -1.1
SCUBE3Q8IX30 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SCUBE3Q8IX30 AC008498.2-201ENST00000624033 2322 ntBASIC8.17□□□□□ -1.1
SCUBE3Q8IX30 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.17□□□□□ -1.1
SCUBE3Q8IX30 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 ENSAP3-201ENST00000312710 333 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 MSRB1P1-201ENST00000396851 354 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 ATP5HP3-201ENST00000396994 486 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 EI24P3-201ENST00000399046 1062 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AL592293.2-201ENST00000422292 996 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 EIF1P3-201ENST00000423841 334 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 RPL37P21-201ENST00000435890 276 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 RPL7P11-201ENST00000437586 658 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 ZNF812P-201ENST00000457674 1694 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC109454.1-201ENST00000471205 498 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC007182.2-201ENST00000489251 402 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 RN7SKP2-201ENST00000517003 319 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 IGKV3D-31-201ENST00000519131 281 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 OR7E1P-201ENST00000533891 958 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC011611.6-201ENST00000547483 255 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 MIR4793-201ENST00000577502 87 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 KPNA2P3-201ENST00000584190 848 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC011453.2-201ENST00000603737 729 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC018695.5-201ENST00000605872 315 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC004908.2-201ENST00000609090 574 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AL606760.4-201ENST00000617613 718 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC011815.3-201ENST00000624194 473 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC024023.1-201ENST00000624530 922 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 AC010653.3-201ENST00000635332 232 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 RPL36AP21-202ENST00000639134 430 ntBASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SCUBE3Q8IX30 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 NSRP1P1-201ENST00000444067 1693 ntBASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 AC100871.1-201ENST00000507871 1456 ntBASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 MARK2P10-201ENST00000454959 1437 ntBASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 EEF1A1P42-201ENST00000613436 1331 ntBASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 RNU5D-1-201ENST00000363299 116 ntBASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 SNORA33.2-201ENST00000365413 134 ntBASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 AMELY-202ENST00000383036 621 ntTSL 5 BASIC8.15□□□□□ -1.1
SCUBE3Q8IX30 AL603908.1-201ENST00000406098 201 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms