RNA–Protein interactions for RNA: ENST00000542689.1

LINC01489-201, Transcript of long intergenic non-protein coding RNA 1489, humanhuman

TSL 5 BASIC

Gene LINC01489, Length 605 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01489-201ENST00000542689 AEBP2Q6ZN18 517 aaPredicted RBP22.63■■□□□ 1.21
LINC01489-201ENST00000542689 CHIC1Q5VXU3 224 aa21.21■□□□□ 0.99
LINC01489-201ENST00000542689 SENP3Q9H4L4 574 aaPredicted RBP19.41■□□□□ 0.7
LINC01489-201ENST00000542689 PHF23Q9BUL5 403 aaPredicted RBP19.09■□□□□ 0.65
LINC01489-201ENST00000542689 FOXD1Q16676 465 aa18.09■□□□□ 0.49
LINC01489-201ENST00000542689 POTEDQ86YR6 584 aa17.19■□□□□ 0.34
LINC01489-201ENST00000542689 MSH5O43196 834 aa17.09■□□□□ 0.33
LINC01489-201ENST00000542689 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
LINC01489-201ENST00000542689 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
LINC01489-201ENST00000542689 PPP6R1Q9UPN7 881 aa16.66■□□□□ 0.26
LINC01489-201ENST00000542689 ADRA2BP18089 450 aa16.62■□□□□ 0.25
LINC01489-201ENST00000542689 MAPK8IP2Q13387 824 aaPredicted RBP15.35■□□□□ 0.05
LINC01489-201ENST00000542689 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
LINC01489-201ENST00000542689 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
LINC01489-201ENST00000542689 CACNB1Q02641 598 aaPredicted RBP14.88□□□□□ -0.03
LINC01489-201ENST00000542689 DCAF8L1A6NGE4 600 aa14.79□□□□□ -0.04
LINC01489-201ENST00000542689 PPP4R3CPQ6ZMV5 832 aa14.7□□□□□ -0.06
LINC01489-201ENST00000542689 HOXD11P31277 338 aaPredicted RBP14.61□□□□□ -0.07
LINC01489-201ENST00000542689 RNF39Q9H2S5 420 aa14.53□□□□□ -0.08
LINC01489-201ENST00000542689 CNKSR2Q8WXI2 1034 aa14.5□□□□□ -0.09
LINC01489-201ENST00000542689 RNF216Q9NWF9 866 aaPredicted RBP14.43□□□□□ -0.1
LINC01489-201ENST00000542689 C1QBPQ07021 282 aaKnown RBP14.31□□□□□ -0.12
LINC01489-201ENST00000542689 DNAJC5BQ9UF47 199 aa14.15□□□□□ -0.14
LINC01489-201ENST00000542689 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
LINC01489-201ENST00000542689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14□□□□□ -0.17
LINC01489-201ENST00000542689 NPM3O75607 178 aaKnown RBP13.83□□□□□ -0.2
LINC01489-201ENST00000542689 U3KPZ7 1027 aaPredicted RBP13.61□□□□□ -0.23
LINC01489-201ENST00000542689 CAPN15O75808 1086 aa13.56□□□□□ -0.24
LINC01489-201ENST00000542689 SPINK5Q9NQ38 1064 aaPredicted RBP13.53□□□□□ -0.24
LINC01489-201ENST00000542689 DSG3P32926 999 aa13.5□□□□□ -0.25
LINC01489-201ENST00000542689 POTEHQ6S545 545 aa13.43□□□□□ -0.26
LINC01489-201ENST00000542689 KCNA4P22459 653 aa13.3□□□□□ -0.28
LINC01489-201ENST00000542689 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
LINC01489-201ENST00000542689 TRHP20396 242 aaPredicted RBP13.26□□□□□ -0.29
LINC01489-201ENST00000542689 APLP2Q06481 763 aa13.26□□□□□ -0.29
LINC01489-201ENST00000542689 ABCB7O75027 752 aa13.22□□□□□ -0.29
LINC01489-201ENST00000542689 ZNF219Q9P2Y4 722 aaPredicted RBP13.22□□□□□ -0.29
LINC01489-201ENST00000542689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
LINC01489-201ENST00000542689 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
LINC01489-201ENST00000542689 SAMD1Q6SPF0 538 aaPredicted RBP13.07□□□□□ -0.32
LINC01489-201ENST00000542689 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
LINC01489-201ENST00000542689 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
LINC01489-201ENST00000542689 POLA2Q14181 598 aa12.81□□□□□ -0.36
LINC01489-201ENST00000542689 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
LINC01489-201ENST00000542689 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
LINC01489-201ENST00000542689 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
LINC01489-201ENST00000542689 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.41
LINC01489-201ENST00000542689 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.41
LINC01489-201ENST00000542689 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
LINC01489-201ENST00000542689 OSCARQ8IYS5 282 aa12.44□□□□□ -0.42
LINC01489-201ENST00000542689 SP7Q8TDD2 431 aaPredicted RBP12.44□□□□□ -0.42
LINC01489-201ENST00000542689 REM2Q8IYK8 340 aaPredicted RBP12.43□□□□□ -0.42
LINC01489-201ENST00000542689 PIP4P2Q8N4L2 257 aa12.38□□□□□ -0.43
LINC01489-201ENST00000542689 PITPNM1O00562 1244 aa12.3□□□□□ -0.44
LINC01489-201ENST00000542689 HAX1O00165 279 aa12.27□□□□□ -0.45
LINC01489-201ENST00000542689 FXR2P51116 673 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC01489-201ENST00000542689 ZBTB22O15209 634 aa12.2□□□□□ -0.46
LINC01489-201ENST00000542689 ATXN8OSP0DMR3 200 aa12.15□□□□□ -0.46
LINC01489-201ENST00000542689 SPDYE2BA6NHP3 402 aa12.12□□□□□ -0.47
LINC01489-201ENST00000542689 SPDYE6P0CI01 402 aa12.12□□□□□ -0.47
LINC01489-201ENST00000542689 FBLN2P98095 1184 aa12.12□□□□□ -0.47
LINC01489-201ENST00000542689 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
LINC01489-201ENST00000542689 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
LINC01489-201ENST00000542689 EVX2Q03828 476 aa12.03□□□□□ -0.48
LINC01489-201ENST00000542689 CLEC11AQ9Y240 323 aa12.01□□□□□ -0.49
LINC01489-201ENST00000542689 SPDYE1Q8NFV5 336 aaPredicted RBP12□□□□□ -0.49
LINC01489-201ENST00000542689 PRKAR2AP13861 404 aaKnown RBP11.99□□□□□ -0.49
LINC01489-201ENST00000542689 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
LINC01489-201ENST00000542689 MKRN4PQ13434 485 aaPredicted RBP11.92□□□□□ -0.5
LINC01489-201ENST00000542689 SSUH2Q9Y2M2 353 aa11.89□□□□□ -0.51
LINC01489-201ENST00000542689 C19orf67A6NJJ6 358 aa11.85□□□□□ -0.51
LINC01489-201ENST00000542689 CHADLQ6NUI6 762 aa11.79□□□□□ -0.52
LINC01489-201ENST00000542689 GABBR2O75899 941 aa11.77□□□□□ -0.53
LINC01489-201ENST00000542689 PRR29P0C7W0 189 aa11.75□□□□□ -0.53
LINC01489-201ENST00000542689 PABPN1Q86U42 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC01489-201ENST00000542689 LHX8Q68G74 356 aa11.67□□□□□ -0.54
LINC01489-201ENST00000542689 CD44P16070 742 aaKnown RBP11.6□□□□□ -0.55
LINC01489-201ENST00000542689 FARP1Q9Y4F1 1045 aaPredicted RBP11.57□□□□□ -0.56
LINC01489-201ENST00000542689 POTEIP0CG38 1075 aa11.48□□□□□ -0.57
LINC01489-201ENST00000542689 CLCN6P51797 869 aa11.47□□□□□ -0.57
LINC01489-201ENST00000542689 CSRNP3Q8WYN3 585 aa11.47□□□□□ -0.57
LINC01489-201ENST00000542689 NISCHQ9Y2I1 1504 aa11.45□□□□□ -0.58
LINC01489-201ENST00000542689 DCBLD2Q96PD2 775 aa11.44□□□□□ -0.58
LINC01489-201ENST00000542689 ZRANB1Q9UGI0 708 aa11.4□□□□□ -0.58
LINC01489-201ENST00000542689 ZNF579Q8NAF0 562 aaKnown RBP11.38□□□□□ -0.59
LINC01489-201ENST00000542689 STAG3Q9UJ98 1225 aa11.36□□□□□ -0.59
LINC01489-201ENST00000542689 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
LINC01489-201ENST00000542689 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
LINC01489-201ENST00000542689 GALR2O43603 387 aaPredicted RBP11.27□□□□□ -0.61
LINC01489-201ENST00000542689 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
LINC01489-201ENST00000542689 SPDYE4A6NLX3 237 aa11.24□□□□□ -0.61
LINC01489-201ENST00000542689 PLSCR2Q9NRY7 297 aa11.24□□□□□ -0.61
LINC01489-201ENST00000542689 PHF12Q96QT6 1004 aa11.2□□□□□ -0.62
LINC01489-201ENST00000542689 NPM1P06748 294 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC01489-201ENST00000542689 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
LINC01489-201ENST00000542689 POTEB2H3BUK9 544 aa11.1□□□□□ -0.63
LINC01489-201ENST00000542689 MNX1P50219 401 aaPredicted RBP11.09□□□□□ -0.63
LINC01489-201ENST00000542689 PELP1Q8IZL8 1130 aaKnown RBP11.06□□□□□ -0.64
LINC01489-201ENST00000542689 MS4A3Q96HJ5 214 aa11.04□□□□□ -0.64
LINC01489-201ENST00000542689 METRNQ9UJH8 293 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms