Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 FBXL21-201ENST00000297158 1305 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 AC023490.2-201ENST00000359859 470 ntBASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 RN7SKP78-201ENST00000364711 318 ntBASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 AC115283.1-201ENST00000427353 400 ntBASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 TCEA1P3-201ENST00000443005 880 ntBASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 AC069304.1-201ENST00000491593 704 ntBASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 ENPP7P11-201ENST00000505915 627 ntBASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 FTH1P11-201ENST00000517577 551 ntBASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 AL353729.2-201ENST00000605859 1249 ntBASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 OR11H2-202ENST00000641517 1085 ntBASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.22□□□□□ -1.57
TRAPPC4Q9Y296 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
TRAPPC4Q9Y296 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
TRAPPC4Q9Y296 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 OR7E25P-201ENST00000344844 931 ntBASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 RPS3AP2-201ENST00000407190 754 ntBASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 RN7SKP240-201ENST00000410583 375 ntBASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 DNAJA1P5-201ENST00000440278 943 ntBASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AC105384.2-201ENST00000508433 640 ntBASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AC005363.1-201ENST00000530779 351 ntBASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 NANOGNBP2-201ENST00000544753 553 ntBASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AL034374.2-201ENST00000605281 548 ntBASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AC129915.3-201ENST00000634128 948 ntBASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 OR8G3P-202ENST00000641572 1255 ntBASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 AP004607.3-201ENST00000530354 3915 ntBASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
TRAPPC4Q9Y296 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 TMSB4XP2-201ENST00000335179 210 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 RNA5SP500-201ENST00000364486 119 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 HMGN1P20-201ENST00000411849 300 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 MRPL53P1-201ENST00000414323 319 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 RNGTTP1-201ENST00000420965 728 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 PCBP2P1-201ENST00000437262 977 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms