RNA–Protein interactions for RNA: ENST00000516179.1

RNU4ATAC18P-201, Transcript of RNA, U4atac small nuclear 18, pseudogene, humanhuman

BASIC

Gene RNU4ATAC18P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC18P-201ENST00000516179 NISCHQ9Y2I1 1504 aa11.06□□□□□ -0.64
RNU4ATAC18P-201ENST00000516179 AEBP2Q6ZN18 517 aaPredicted RBP10.38□□□□□ -0.75
RNU4ATAC18P-201ENST00000516179 CHIC1Q5VXU3 224 aa9.59□□□□□ -0.87
RNU4ATAC18P-201ENST00000516179 CCDC180Q9P1Z9 1646 aa9.5□□□□□ -0.89
RNU4ATAC18P-201ENST00000516179 ZCCHC6Q5VYS8 1495 aaKnown RBP9.36□□□□□ -0.91
RNU4ATAC18P-201ENST00000516179 SHROOM4Q9ULL8 1493 aa9.33□□□□□ -0.92
RNU4ATAC18P-201ENST00000516179 SUPT5HO00267 1087 aaKnown RBP9.21□□□□□ -0.94
RNU4ATAC18P-201ENST00000516179 DCAF1Q9Y4B6 1507 aa9.16□□□□□ -0.94
RNU4ATAC18P-201ENST00000516179 DCAF8L2P0C7V8 631 aa9.08□□□□□ -0.96
RNU4ATAC18P-201ENST00000516179 POTEDQ86YR6 584 aa9.04□□□□□ -0.96
RNU4ATAC18P-201ENST00000516179 MYO15BQ96JP2 1530 aa8.9□□□□□ -0.98
RNU4ATAC18P-201ENST00000516179 SENP3Q9H4L4 574 aaPredicted RBP8.87□□□□□ -0.99
RNU4ATAC18P-201ENST00000516179 ABCC9O60706 1549 aa8.86□□□□□ -0.99
RNU4ATAC18P-201ENST00000516179 HRCP23327 699 aa8.86□□□□□ -0.99
RNU4ATAC18P-201ENST00000516179 SCRIBQ14160 1630 aa8.77□□□□□ -1.01
RNU4ATAC18P-201ENST00000516179 PCGF6Q9BYE7 350 aa8.77□□□□□ -1.01
RNU4ATAC18P-201ENST00000516179 NACADO15069 1562 aa8.75□□□□□ -1.01
RNU4ATAC18P-201ENST00000516179 RB1CC1Q8TDY2 1594 aa8.73□□□□□ -1.01
RNU4ATAC18P-201ENST00000516179 RSF1Q96T23 1441 aaPredicted RBP8.72□□□□□ -1.01
RNU4ATAC18P-201ENST00000516179 TRIM26Q12899 539 aaPredicted RBP8.7□□□□□ -1.02
RNU4ATAC18P-201ENST00000516179 PHF23Q9BUL5 403 aaPredicted RBP8.7□□□□□ -1.02
RNU4ATAC18P-201ENST00000516179 LOC105371045A0A1W2PR82 267 aa8.66□□□□□ -1.02
RNU4ATAC18P-201ENST00000516179 TRIM41Q8WV44 630 aa8.66□□□□□ -1.02
RNU4ATAC18P-201ENST00000516179 ZEB1P37275 1124 aaPredicted RBP8.65□□□□□ -1.02
RNU4ATAC18P-201ENST00000516179 BAZ1AQ9NRL2 1556 aaPredicted RBP8.55□□□□□ -1.04
RNU4ATAC18P-201ENST00000516179 MROH2BQ7Z745 1585 aa8.54□□□□□ -1.04
RNU4ATAC18P-201ENST00000516179 WIZO95785 1651 aa8.53□□□□□ -1.04
RNU4ATAC18P-201ENST00000516179 CECR2Q9BXF3 1484 aa8.52□□□□□ -1.05
RNU4ATAC18P-201ENST00000516179 PPARGC1BQ86YN6 1023 aaKnown RBP8.51□□□□□ -1.05
RNU4ATAC18P-201ENST00000516179 FAM9AQ8IZU1 332 aaPredicted RBP8.49□□□□□ -1.05
RNU4ATAC18P-201ENST00000516179 TOP2AP11388 1531 aaKnown RBP8.46□□□□□ -1.05
RNU4ATAC18P-201ENST00000516179 EIF4G1Q04637 1599 aaKnown RBP8.44□□□□□ -1.06
RNU4ATAC18P-201ENST00000516179 SMARCA4P51532 1647 aa8.43□□□□□ -1.06
RNU4ATAC18P-201ENST00000516179 FOXD1Q16676 465 aa8.41□□□□□ -1.06
RNU4ATAC18P-201ENST00000516179 EEA1Q15075 1411 aa8.4□□□□□ -1.06
RNU4ATAC18P-201ENST00000516179 UNC13AQ9UPW8 1703 aa8.4□□□□□ -1.07
RNU4ATAC18P-201ENST00000516179 SMARCA2P51531 1590 aa8.37□□□□□ -1.07
RNU4ATAC18P-201ENST00000516179 CCDC88BA6NC98 1476 aa8.36□□□□□ -1.07
RNU4ATAC18P-201ENST00000516179 EHMT2Q96KQ7 1210 aa8.34□□□□□ -1.07
RNU4ATAC18P-201ENST00000516179 WRNQ14191 1432 aaPredicted RBP eCLIP8.34□□□□□ -1.07
RNU4ATAC18P-201ENST00000516179 TNIKQ9UKE5 1360 aa8.32□□□□□ -1.08
RNU4ATAC18P-201ENST00000516179 ABCC8Q09428 1581 aa8.31□□□□□ -1.08
RNU4ATAC18P-201ENST00000516179 CCER1Q8TC90 406 aaPredicted RBP8.31□□□□□ -1.08
RNU4ATAC18P-201ENST00000516179 PELP1Q8IZL8 1130 aaKnown RBP8.3□□□□□ -1.08
RNU4ATAC18P-201ENST00000516179 PEG3Q9GZU2 1588 aa8.3□□□□□ -1.08
RNU4ATAC18P-201ENST00000516179 CEP162Q5TB80 1403 aa8.29□□□□□ -1.08
RNU4ATAC18P-201ENST00000516179 GOLGA3Q08378 1498 aa8.28□□□□□ -1.08
RNU4ATAC18P-201ENST00000516179 CSRNP3Q8WYN3 585 aa8.28□□□□□ -1.08
RNU4ATAC18P-201ENST00000516179 UBTFP17480 764 aaKnown RBP8.25□□□□□ -1.09
RNU4ATAC18P-201ENST00000516179 BICRAQ9NZM4 1560 aa8.23□□□□□ -1.09
RNU4ATAC18P-201ENST00000516179 SOGA1O94964 1423 aa8.23□□□□□ -1.09
RNU4ATAC18P-201ENST00000516179 KIF21BO75037 1637 aa8.23□□□□□ -1.09
RNU4ATAC18P-201ENST00000516179 CEP164Q9UPV0 1460 aa8.23□□□□□ -1.09
RNU4ATAC18P-201ENST00000516179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.22□□□□□ -1.09
RNU4ATAC18P-201ENST00000516179 CENPBP07199 599 aaPredicted RBP8.2□□□□□ -1.1
RNU4ATAC18P-201ENST00000516179 BAZ1BQ9UIG0 1483 aaKnown RBP8.19□□□□□ -1.1
RNU4ATAC18P-201ENST00000516179 APLP2Q06481 763 aa8.18□□□□□ -1.1
RNU4ATAC18P-201ENST00000516179 ATAD2BQ9ULI0 1458 aa8.17□□□□□ -1.1
RNU4ATAC18P-201ENST00000516179 DIEXFQ68CQ4 756 aaKnown RBP8.16□□□□□ -1.1
RNU4ATAC18P-201ENST00000516179 PABPN1Q86U42 306 aaKnown RBP eCLIP8.16□□□□□ -1.1
RNU4ATAC18P-201ENST00000516179 RUSC2Q8N2Y8 1516 aa8.16□□□□□ -1.1
RNU4ATAC18P-201ENST00000516179 SYNJ1O43426 1573 aa8.15□□□□□ -1.1
RNU4ATAC18P-201ENST00000516179 CLIP1P30622 1438 aa8.14□□□□□ -1.11
RNU4ATAC18P-201ENST00000516179 VPS8Q8N3P4 1428 aa8.13□□□□□ -1.11
RNU4ATAC18P-201ENST00000516179 ACIN1Q9UKV3 1341 aaKnown RBP8.13□□□□□ -1.11
RNU4ATAC18P-201ENST00000516179 SCAF1Q9H7N4 1312 aaKnown RBP8.12□□□□□ -1.11
RNU4ATAC18P-201ENST00000516179 TOP2BQ02880 1626 aa8.12□□□□□ -1.11
RNU4ATAC18P-201ENST00000516179 ZNF316A6NFI3 1004 aaPredicted RBP8.12□□□□□ -1.11
RNU4ATAC18P-201ENST00000516179 BIVM-ERCC5R4GMW8 1640 aa8.11□□□□□ -1.11
RNU4ATAC18P-201ENST00000516179 TTBK1Q5TCY1 1321 aaPredicted RBP8.11□□□□□ -1.11
RNU4ATAC18P-201ENST00000516179 ERICH3Q5RHP9 1530 aa8.1□□□□□ -1.11
RNU4ATAC18P-201ENST00000516179 HMGXB3Q12766 1538 aa8.08□□□□□ -1.12
RNU4ATAC18P-201ENST00000516179 RAPGEF2Q9Y4G8 1499 aa8.06□□□□□ -1.12
RNU4ATAC18P-201ENST00000516179 CLSPNQ9HAW4 1339 aa8.05□□□□□ -1.12
RNU4ATAC18P-201ENST00000516179 MSH5O43196 834 aa8.04□□□□□ -1.12
RNU4ATAC18P-201ENST00000516179 HNRNPUL2Q1KMD3 747 aaKnown RBP8.04□□□□□ -1.12
RNU4ATAC18P-201ENST00000516179 PRDM2Q13029 1718 aa8.03□□□□□ -1.12
RNU4ATAC18P-201ENST00000516179 NCAPD3P42695 1498 aa8.03□□□□□ -1.12
RNU4ATAC18P-201ENST00000516179 KIF27Q86VH2 1401 aa8.03□□□□□ -1.12
RNU4ATAC18P-201ENST00000516179 NEUROD1Q13562 356 aa8.02□□□□□ -1.13
RNU4ATAC18P-201ENST00000516179 PRXQ9BXM0 1461 aa8.01□□□□□ -1.13
RNU4ATAC18P-201ENST00000516179 GTF3C3Q9Y5Q9 886 aa8□□□□□ -1.13
RNU4ATAC18P-201ENST00000516179 MYT1Q01538 1121 aa7.98□□□□□ -1.13
RNU4ATAC18P-201ENST00000516179 CFTRP13569 1480 aa7.97□□□□□ -1.13
RNU4ATAC18P-201ENST00000516179 CUX1P39880 1505 aa7.97□□□□□ -1.13
RNU4ATAC18P-201ENST00000516179 ARAP1Q96P48 1450 aa7.96□□□□□ -1.13
RNU4ATAC18P-201ENST00000516179 RANGAP1P46060 587 aaPredicted RBP7.96□□□□□ -1.14
RNU4ATAC18P-201ENST00000516179 RRBP1Q9P2E9 1410 aaKnown RBP7.95□□□□□ -1.14
RNU4ATAC18P-201ENST00000516179 MAP3K1Q13233 1512 aa7.93□□□□□ -1.14
RNU4ATAC18P-201ENST00000516179 DHX57Q6P158 1386 aaKnown RBP7.92□□□□□ -1.14
RNU4ATAC18P-201ENST00000516179 MIER1Q8N108 512 aa7.91□□□□□ -1.14
RNU4ATAC18P-201ENST00000516179 CCNB3Q8WWL7 1395 aa7.91□□□□□ -1.14
RNU4ATAC18P-201ENST00000516179 CUX2O14529 1486 aa7.91□□□□□ -1.14
RNU4ATAC18P-201ENST00000516179 YTHDC1Q96MU7 727 aaKnown RBP7.9□□□□□ -1.14
RNU4ATAC18P-201ENST00000516179 ARHGAP35Q9NRY4 1499 aa7.89□□□□□ -1.15
RNU4ATAC18P-201ENST00000516179 FHAD1B1AJZ9 1412 aa7.88□□□□□ -1.15
RNU4ATAC18P-201ENST00000516179 TIAM1Q13009 1591 aa7.88□□□□□ -1.15
RNU4ATAC18P-201ENST00000516179 CADPSQ9ULU8 1353 aa7.87□□□□□ -1.15
RNU4ATAC18P-201ENST00000516179 KANK4Q5T7N3 995 aaPredicted RBP7.87□□□□□ -1.15
RNU4ATAC18P-201ENST00000516179 CARMIL1Q5VZK9 1371 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms