RNA–Protein interactions for RNA: ENST00000358545.6

TNFSF11-202, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 1,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-202ENST00000358545 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
TNFSF11-202ENST00000358545 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
TNFSF11-202ENST00000358545 PHF23Q9BUL5 403 aaPredicted RBP17.82■□□□□ 0.44
TNFSF11-202ENST00000358545 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
TNFSF11-202ENST00000358545 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
TNFSF11-202ENST00000358545 NISCHQ9Y2I1 1504 aa16.32■□□□□ 0.2
TNFSF11-202ENST00000358545 FOXD1Q16676 465 aa15.9■□□□□ 0.14
TNFSF11-202ENST00000358545 PPP6R1Q9UPN7 881 aa15.61■□□□□ 0.09
TNFSF11-202ENST00000358545 ADRA2BP18089 450 aa15.6■□□□□ 0.09
TNFSF11-202ENST00000358545 ABCC9O60706 1549 aa15.37■□□□□ 0.05
TNFSF11-202ENST00000358545 PIAS4Q8N2W9 510 aaPredicted RBP15.07■□□□□ 0
TNFSF11-202ENST00000358545 CCDC180Q9P1Z9 1646 aa14.93□□□□□ -0.02
TNFSF11-202ENST00000358545 KCNA4P22459 653 aa14.82□□□□□ -0.04
TNFSF11-202ENST00000358545 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
TNFSF11-202ENST00000358545 PPP4R3CPQ6ZMV5 832 aa14.61□□□□□ -0.07
TNFSF11-202ENST00000358545 EHMT2Q96KQ7 1210 aa14.56□□□□□ -0.08
TNFSF11-202ENST00000358545 MSH5O43196 834 aa14.44□□□□□ -0.1
TNFSF11-202ENST00000358545 RB1CC1Q8TDY2 1594 aa14.41□□□□□ -0.1
TNFSF11-202ENST00000358545 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
TNFSF11-202ENST00000358545 SLC4A1APQ9BWU0 796 aaKnown RBP14.23□□□□□ -0.13
TNFSF11-202ENST00000358545 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.13
TNFSF11-202ENST00000358545 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
TNFSF11-202ENST00000358545 NACADO15069 1562 aa14.17□□□□□ -0.14
TNFSF11-202ENST00000358545 NPM3O75607 178 aaKnown RBP14.15□□□□□ -0.14
TNFSF11-202ENST00000358545 SCAF1Q9H7N4 1312 aaKnown RBP14.14□□□□□ -0.15
TNFSF11-202ENST00000358545 CSRNP3Q8WYN3 585 aa14.1□□□□□ -0.15
TNFSF11-202ENST00000358545 CNKSR2Q8WXI2 1034 aa14.09□□□□□ -0.15
TNFSF11-202ENST00000358545 MAPK8IP2Q13387 824 aaPredicted RBP14.06□□□□□ -0.16
TNFSF11-202ENST00000358545 BICRAQ9NZM4 1560 aa14.03□□□□□ -0.16
TNFSF11-202ENST00000358545 DCAF8L2P0C7V8 631 aa13.95□□□□□ -0.18
TNFSF11-202ENST00000358545 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
TNFSF11-202ENST00000358545 CC2D2AQ9P2K1 1620 aa13.88□□□□□ -0.19
TNFSF11-202ENST00000358545 CECR2Q9BXF3 1484 aa13.88□□□□□ -0.19
TNFSF11-202ENST00000358545 MYO15BQ96JP2 1530 aa13.77□□□□□ -0.21
TNFSF11-202ENST00000358545 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
TNFSF11-202ENST00000358545 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
TNFSF11-202ENST00000358545 SHROOM4Q9ULL8 1493 aa13.72□□□□□ -0.21
TNFSF11-202ENST00000358545 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
TNFSF11-202ENST00000358545 ZBTB22O15209 634 aa13.64□□□□□ -0.23
TNFSF11-202ENST00000358545 HOXD11P31277 338 aaPredicted RBP13.59□□□□□ -0.23
TNFSF11-202ENST00000358545 SCRIBQ14160 1630 aa13.59□□□□□ -0.23
TNFSF11-202ENST00000358545 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
TNFSF11-202ENST00000358545 ZCCHC6Q5VYS8 1495 aaKnown RBP13.44□□□□□ -0.26
TNFSF11-202ENST00000358545 DCAF1Q9Y4B6 1507 aa13.43□□□□□ -0.26
TNFSF11-202ENST00000358545 CUX2O14529 1486 aa13.42□□□□□ -0.26
TNFSF11-202ENST00000358545 ERCC6Q03468 1493 aa13.3□□□□□ -0.28
TNFSF11-202ENST00000358545 SLC4A2P04920 1241 aa13.29□□□□□ -0.28
TNFSF11-202ENST00000358545 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
TNFSF11-202ENST00000358545 DCAF8L1A6NGE4 600 aa13.13□□□□□ -0.31
TNFSF11-202ENST00000358545 THOC2Q8NI27 1593 aaKnown RBP13.08□□□□□ -0.32
TNFSF11-202ENST00000358545 NESP48681 1621 aa13.07□□□□□ -0.32
TNFSF11-202ENST00000358545 NCAPD3P42695 1498 aa13.05□□□□□ -0.32
TNFSF11-202ENST00000358545 MYCNP04198 464 aaPredicted RBP13.02□□□□□ -0.33
TNFSF11-202ENST00000358545 SMARCA2P51531 1590 aa12.97□□□□□ -0.33
TNFSF11-202ENST00000358545 KIF21AQ7Z4S6 1674 aa12.97□□□□□ -0.33
TNFSF11-202ENST00000358545 ATAD2BQ9ULI0 1458 aa12.97□□□□□ -0.33
TNFSF11-202ENST00000358545 HMGXB3Q12766 1538 aa12.96□□□□□ -0.33
TNFSF11-202ENST00000358545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.93□□□□□ -0.34
TNFSF11-202ENST00000358545 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
TNFSF11-202ENST00000358545 SMARCA4P51532 1647 aa12.89□□□□□ -0.35
TNFSF11-202ENST00000358545 LAMC3Q9Y6N6 1575 aa12.89□□□□□ -0.35
TNFSF11-202ENST00000358545 BAZ1AQ9NRL2 1556 aaPredicted RBP12.84□□□□□ -0.35
TNFSF11-202ENST00000358545 BAZ1BQ9UIG0 1483 aaKnown RBP12.84□□□□□ -0.35
TNFSF11-202ENST00000358545 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.35
TNFSF11-202ENST00000358545 PDS5BQ9NTI5 1447 aa12.78□□□□□ -0.36
TNFSF11-202ENST00000358545 WDR62O43379 1518 aa12.74□□□□□ -0.37
TNFSF11-202ENST00000358545 MRC2Q9UBG0 1479 aa12.74□□□□□ -0.37
TNFSF11-202ENST00000358545 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
TNFSF11-202ENST00000358545 PEG3Q9GZU2 1588 aa12.73□□□□□ -0.37
TNFSF11-202ENST00000358545 FKBP8Q14318 412 aa12.71□□□□□ -0.38
TNFSF11-202ENST00000358545 RIMBP3CA6NJZ7 1639 aa12.69□□□□□ -0.38
TNFSF11-202ENST00000358545 RIMBP3BA6NNM3 1639 aa12.69□□□□□ -0.38
TNFSF11-202ENST00000358545 RIMBP3Q9UFD9 1639 aa12.69□□□□□ -0.38
TNFSF11-202ENST00000358545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
TNFSF11-202ENST00000358545 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
TNFSF11-202ENST00000358545 AMER1Q5JTC6 1135 aaPredicted RBP12.67□□□□□ -0.38
TNFSF11-202ENST00000358545 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
TNFSF11-202ENST00000358545 OSCARQ8IYS5 282 aa12.67□□□□□ -0.38
TNFSF11-202ENST00000358545 RTN4Q9NQC3 1192 aaKnown RBP12.67□□□□□ -0.38
TNFSF11-202ENST00000358545 CADPSQ9ULU8 1353 aa12.62□□□□□ -0.39
TNFSF11-202ENST00000358545 CEP164Q9UPV0 1460 aa12.6□□□□□ -0.39
TNFSF11-202ENST00000358545 POTEDQ86YR6 584 aa12.59□□□□□ -0.39
TNFSF11-202ENST00000358545 MROH2BQ7Z745 1585 aa12.59□□□□□ -0.39
TNFSF11-202ENST00000358545 ARHGEF11O15085 1522 aa12.55□□□□□ -0.4
TNFSF11-202ENST00000358545 FANCD2Q9BXW9 1451 aa12.52□□□□□ -0.4
TNFSF11-202ENST00000358545 URB2Q14146 1524 aaKnown RBP12.47□□□□□ -0.41
TNFSF11-202ENST00000358545 WIZO95785 1651 aa12.47□□□□□ -0.41
TNFSF11-202ENST00000358545 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
TNFSF11-202ENST00000358545 SLC24A1O60721 1099 aa12.46□□□□□ -0.42
TNFSF11-202ENST00000358545 RNF39Q9H2S5 420 aa12.46□□□□□ -0.42
TNFSF11-202ENST00000358545 CYB5RLQ6IPT4 315 aa12.43□□□□□ -0.42
TNFSF11-202ENST00000358545 APLP2Q06481 763 aa12.42□□□□□ -0.42
TNFSF11-202ENST00000358545 ZNF219Q9P2Y4 722 aaPredicted RBP12.41□□□□□ -0.42
TNFSF11-202ENST00000358545 CHD1O14646 1710 aa12.4□□□□□ -0.42
TNFSF11-202ENST00000358545 ARAP1Q96P48 1450 aa12.4□□□□□ -0.42
TNFSF11-202ENST00000358545 ZNF608Q9ULD9 1512 aaPredicted RBP12.4□□□□□ -0.42
TNFSF11-202ENST00000358545 CFTRP13569 1480 aa12.39□□□□□ -0.43
TNFSF11-202ENST00000358545 PRDM2Q13029 1718 aa12.39□□□□□ -0.43
TNFSF11-202ENST00000358545 SPINK5Q9NQ38 1064 aaPredicted RBP12.38□□□□□ -0.43
TNFSF11-202ENST00000358545 EIF4G3O43432 1585 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms