Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 HSPD1P9-201ENST00000420325 1636 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 CASC19-243ENST00000641588 1546 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC106872.5-201ENST00000508856 1416 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AL357556.1-201ENST00000421884 1388 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AL139327.1-201ENST00000382988 348 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 SNORA10B-201ENST00000384458 133 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 MIR1277-201ENST00000408536 78 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 RN7SKP146-201ENST00000410242 334 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 GSTA10P-201ENST00000412182 576 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 KCTD9P3-201ENST00000434597 1169 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AL512593.1-201ENST00000444758 779 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC098824.1-201ENST00000453565 980 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 MTND6P6-201ENST00000478031 263 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 RN7SL152P-201ENST00000484176 298 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 RN7SL655P-201ENST00000486087 298 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC079768.1-201ENST00000503181 711 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 CHCHD2P7-201ENST00000508008 452 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC113352.1-201ENST00000513196 666 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AP002453.2-201ENST00000533503 320 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC124947.2-202ENST00000552735 133 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC138749.2-201ENST00000566048 167 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC044792.1-201ENST00000593294 196 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 BX323046.1-201ENST00000610145 535 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC004836.1-201ENST00000623032 634 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 COL6A4P1-202ENST00000487147 4317 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 MAPK10-333ENST00000641607 2481 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 AC008498.2-201ENST00000624033 2322 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF135Q8IUD6 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.89□□□□□ -1.15
RNF135Q8IUD6 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 Z99496.1-201ENST00000469424 1477 ntBASIC7.88□□□□□ -1.15
RNF135Q8IUD6 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 RNU4-81P-201ENST00000363561 144 ntBASIC7.88□□□□□ -1.15
RNF135Q8IUD6 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RNF135Q8IUD6 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms