RNA–Protein interactions for RNA: ENST00000434597.2

KCTD9P3-201, Transcript of potassium channel tetramerization domain containing 9 pseudogene 3, humanhuman

BASIC

Gene KCTD9P3, Length 1,169 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD9P3-201ENST00000434597 AEBP2Q6ZN18 517 aaPredicted RBP27.03■■□□□ 1.92
KCTD9P3-201ENST00000434597 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
KCTD9P3-201ENST00000434597 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
KCTD9P3-201ENST00000434597 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
KCTD9P3-201ENST00000434597 FOXD1Q16676 465 aa21.67■■□□□ 1.06
KCTD9P3-201ENST00000434597 POTEDQ86YR6 584 aa21.13■□□□□ 0.97
KCTD9P3-201ENST00000434597 MSH5O43196 834 aa20.55■□□□□ 0.88
KCTD9P3-201ENST00000434597 PIAS4Q8N2W9 510 aaPredicted RBP20.13■□□□□ 0.81
KCTD9P3-201ENST00000434597 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
KCTD9P3-201ENST00000434597 PPP6R1Q9UPN7 881 aa19.76■□□□□ 0.75
KCTD9P3-201ENST00000434597 ADRA2BP18089 450 aa19.67■□□□□ 0.74
KCTD9P3-201ENST00000434597 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
KCTD9P3-201ENST00000434597 MAPK8IP2Q13387 824 aaPredicted RBP18.26■□□□□ 0.51
KCTD9P3-201ENST00000434597 CACNB1Q02641 598 aaPredicted RBP18.04■□□□□ 0.48
KCTD9P3-201ENST00000434597 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
KCTD9P3-201ENST00000434597 DCAF8L1A6NGE4 600 aa17.61■□□□□ 0.41
KCTD9P3-201ENST00000434597 RNF39Q9H2S5 420 aa17.46■□□□□ 0.39
KCTD9P3-201ENST00000434597 HOXD11P31277 338 aaPredicted RBP17.34■□□□□ 0.37
KCTD9P3-201ENST00000434597 PPP4R3CPQ6ZMV5 832 aa17.22■□□□□ 0.35
KCTD9P3-201ENST00000434597 C1QBPQ07021 282 aaKnown RBP17.18■□□□□ 0.34
KCTD9P3-201ENST00000434597 RNF216Q9NWF9 866 aaPredicted RBP17.06■□□□□ 0.32
KCTD9P3-201ENST00000434597 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
KCTD9P3-201ENST00000434597 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
KCTD9P3-201ENST00000434597 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.57■□□□□ 0.24
KCTD9P3-201ENST00000434597 POTEHQ6S545 545 aa16.44■□□□□ 0.22
KCTD9P3-201ENST00000434597 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
KCTD9P3-201ENST00000434597 NPM3O75607 178 aaKnown RBP16.13■□□□□ 0.17
KCTD9P3-201ENST00000434597 DSG3P32926 999 aa16.13■□□□□ 0.17
KCTD9P3-201ENST00000434597 CAPN15O75808 1086 aa16.11■□□□□ 0.17
KCTD9P3-201ENST00000434597 U3KPZ7 1027 aaPredicted RBP16.11■□□□□ 0.17
KCTD9P3-201ENST00000434597 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
KCTD9P3-201ENST00000434597 TRHP20396 242 aaPredicted RBP15.7■□□□□ 0.1
KCTD9P3-201ENST00000434597 ABCB7O75027 752 aa15.68■□□□□ 0.1
KCTD9P3-201ENST00000434597 APLP2Q06481 763 aa15.64■□□□□ 0.09
KCTD9P3-201ENST00000434597 ZNF219Q9P2Y4 722 aaPredicted RBP15.64■□□□□ 0.09
KCTD9P3-201ENST00000434597 SLC4A2P04920 1241 aa15.56■□□□□ 0.08
KCTD9P3-201ENST00000434597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.47■□□□□ 0.07
KCTD9P3-201ENST00000434597 HNRNPUL2Q1KMD3 747 aaKnown RBP15.47■□□□□ 0.07
KCTD9P3-201ENST00000434597 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
KCTD9P3-201ENST00000434597 CHRDL2Q6WN34 429 aa15.35■□□□□ 0.05
KCTD9P3-201ENST00000434597 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
KCTD9P3-201ENST00000434597 KCNA4P22459 653 aa15.25■□□□□ 0.03
KCTD9P3-201ENST00000434597 POLA2Q14181 598 aa15.12■□□□□ 0.01
KCTD9P3-201ENST00000434597 SP7Q8TDD2 431 aaPredicted RBP15.12■□□□□ 0.01
KCTD9P3-201ENST00000434597 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
KCTD9P3-201ENST00000434597 AKT1S1Q96B36 256 aa14.93□□□□□ -0.02
KCTD9P3-201ENST00000434597 PIP4P2Q8N4L2 257 aa14.84□□□□□ -0.03
KCTD9P3-201ENST00000434597 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
KCTD9P3-201ENST00000434597 ZBTB12Q9Y330 459 aaPredicted RBP14.78□□□□□ -0.04
KCTD9P3-201ENST00000434597 HAX1O00165 279 aa14.76□□□□□ -0.05
KCTD9P3-201ENST00000434597 OSCARQ8IYS5 282 aa14.67□□□□□ -0.06
KCTD9P3-201ENST00000434597 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
KCTD9P3-201ENST00000434597 ATF5Q9Y2D1 282 aaPredicted RBP14.64□□□□□ -0.07
KCTD9P3-201ENST00000434597 FXR2P51116 673 aaKnown RBP eCLIP14.63□□□□□ -0.07
KCTD9P3-201ENST00000434597 EVX2Q03828 476 aa14.49□□□□□ -0.09
KCTD9P3-201ENST00000434597 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
KCTD9P3-201ENST00000434597 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
KCTD9P3-201ENST00000434597 PRKAR2AP13861 404 aaKnown RBP14.28□□□□□ -0.12
KCTD9P3-201ENST00000434597 SPDYE2BA6NHP3 402 aa14.25□□□□□ -0.13
KCTD9P3-201ENST00000434597 SPDYE6P0CI01 402 aa14.25□□□□□ -0.13
KCTD9P3-201ENST00000434597 SPDYE2Q495Y8 402 aa14.25□□□□□ -0.13
KCTD9P3-201ENST00000434597 CLEC11AQ9Y240 323 aa14.2□□□□□ -0.14
KCTD9P3-201ENST00000434597 C19orf67A6NJJ6 358 aa14.19□□□□□ -0.14
KCTD9P3-201ENST00000434597 LHX8Q68G74 356 aa14.17□□□□□ -0.14
KCTD9P3-201ENST00000434597 SPDYE1Q8NFV5 336 aaPredicted RBP14.16□□□□□ -0.14
KCTD9P3-201ENST00000434597 GABBR2O75899 941 aa14.15□□□□□ -0.14
KCTD9P3-201ENST00000434597 FBLN2P98095 1184 aa14.14□□□□□ -0.15
KCTD9P3-201ENST00000434597 ATXN8OSP0DMR3 200 aa14.06□□□□□ -0.16
KCTD9P3-201ENST00000434597 ZBTB22O15209 634 aa14□□□□□ -0.17
KCTD9P3-201ENST00000434597 ZNF692Q9BU19 519 aaPredicted RBP13.99□□□□□ -0.17
KCTD9P3-201ENST00000434597 CHADLQ6NUI6 762 aa13.97□□□□□ -0.17
KCTD9P3-201ENST00000434597 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
KCTD9P3-201ENST00000434597 MKRN4PQ13434 485 aaPredicted RBP13.92□□□□□ -0.18
KCTD9P3-201ENST00000434597 PRR29P0C7W0 189 aa13.86□□□□□ -0.19
KCTD9P3-201ENST00000434597 PLSCR2Q9NRY7 297 aa13.83□□□□□ -0.2
KCTD9P3-201ENST00000434597 POTEIP0CG38 1075 aa13.82□□□□□ -0.2
KCTD9P3-201ENST00000434597 CD44P16070 742 aaKnown RBP13.78□□□□□ -0.2
KCTD9P3-201ENST00000434597 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
KCTD9P3-201ENST00000434597 CLCN6P51797 869 aa13.71□□□□□ -0.21
KCTD9P3-201ENST00000434597 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
KCTD9P3-201ENST00000434597 DCBLD2Q96PD2 775 aa13.67□□□□□ -0.22
KCTD9P3-201ENST00000434597 ZNF579Q8NAF0 562 aaKnown RBP13.52□□□□□ -0.25
KCTD9P3-201ENST00000434597 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
KCTD9P3-201ENST00000434597 OTUD5Q96G74 571 aa13.45□□□□□ -0.26
KCTD9P3-201ENST00000434597 GALR2O43603 387 aaPredicted RBP13.41□□□□□ -0.26
KCTD9P3-201ENST00000434597 POTEMA6NI47 508 aa13.38□□□□□ -0.27
KCTD9P3-201ENST00000434597 POTEB2H3BUK9 544 aa13.36□□□□□ -0.27
KCTD9P3-201ENST00000434597 CREBZFQ9NS37 354 aa13.34□□□□□ -0.27
KCTD9P3-201ENST00000434597 POTEGQ6S5H5 508 aa13.33□□□□□ -0.28
KCTD9P3-201ENST00000434597 PAK3O75914 559 aaPredicted RBP13.26□□□□□ -0.29
KCTD9P3-201ENST00000434597 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
KCTD9P3-201ENST00000434597 PHF12Q96QT6 1004 aa13.24□□□□□ -0.29
KCTD9P3-201ENST00000434597 PELP1Q8IZL8 1130 aaKnown RBP13.19□□□□□ -0.3
KCTD9P3-201ENST00000434597 PCDH10Q9P2E7 1040 aa13.19□□□□□ -0.3
KCTD9P3-201ENST00000434597 METRNQ9UJH8 293 aa13.13□□□□□ -0.31
KCTD9P3-201ENST00000434597 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
KCTD9P3-201ENST00000434597 ASTLQ6HA08 431 aaPredicted RBP13.08□□□□□ -0.32
KCTD9P3-201ENST00000434597 SLC39A7Q92504 469 aa13.08□□□□□ -0.32
KCTD9P3-201ENST00000434597 C7P10643 843 aa13.07□□□□□ -0.32
KCTD9P3-201ENST00000434597 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms