Protein–RNA interactions for Protein: Q6WN34

CHRDL2, Chordin-like protein 2, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2Q6WN34 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC9.59□□□□□ -0.87
CHRDL2Q6WN34 SNORD91A-202ENST00000609620 191 ntBASIC9.59□□□□□ -0.87
CHRDL2Q6WN34 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
CHRDL2Q6WN34 BHLHB9-204ENST00000448867 3936 ntAPPRIS P1 TSL 4 BASIC9.59□□□□□ -0.87
CHRDL2Q6WN34 TRY2P-202ENST00000616556 2039 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CHRDL2Q6WN34 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHRDL2Q6WN34 ADCY10P1-202ENST00000457653 3785 ntBASIC9.59□□□□□ -0.87
CHRDL2Q6WN34 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
CHRDL2Q6WN34 ALDH1L1-206ENST00000455064 3137 ntTSL 5 BASIC9.59□□□□□ -0.87
CHRDL2Q6WN34 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHRDL2Q6WN34 CNEP1R1-206ENST00000565556 1707 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CHRDL2Q6WN34 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHRDL2Q6WN34 PPP4R1-203ENST00000400556 3925 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
CHRDL2Q6WN34 SMC3-201ENST00000361804 4114 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AL590426.1-201ENST00000440811 2285 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 MBTPS2-202ENST00000379484 4428 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 ATG16L1-205ENST00000392020 3213 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 RAD17-213ENST00000509734 3233 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 RNF43-207ENST00000583753 3560 ntTSL 2 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 SLAMF8-201ENST00000289707 2996 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 CYP4F62P-202ENST00000439137 2144 ntTSL 2 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 PAX6-231ENST00000606377 6901 ntAPPRIS P4 TSL 5 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 MALAT1-202ENST00000534336 8708 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 NT5C1B-201ENST00000304081 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 RNU6-28P-201ENST00000362378 107 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 Y_RNA.76-201ENST00000362931 109 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 SNORA71D-201ENST00000363484 134 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 RN7SKP130-201ENST00000364924 301 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 RNU6-1130P-201ENST00000365434 107 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 SNORA41-201ENST00000384675 132 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 MIR16-1-201ENST00000385271 89 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 MSRB1P1-201ENST00000396851 354 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 BTF3P9-201ENST00000418784 283 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 ATP5LP4-201ENST00000434169 307 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 FTH1P16-201ENST00000435241 552 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AC092421.1-201ENST00000448148 418 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 RN7SKP99-201ENST00000517028 307 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 SERPINA15P-201ENST00000529287 266 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AC090241.1-201ENST00000587732 621 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AP001120.4-201ENST00000590231 108 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AC011477.1-201ENST00000591884 544 ntTSL 5 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 FXYD6P1-201ENST00000604857 285 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AL109933.4-201ENST00000612111 157 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 uc_338.34-201ENST00000617467 174 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AC091953.2-201ENST00000623979 160 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 SPATA41-202ENST00000560282 2072 ntTSL 2 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 YPEL4-203ENST00000524669 4000 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AL592158.1-201ENST00000632210 4477 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 OR2A20P-204ENST00000641121 2173 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 ECE1-202ENST00000357071 3763 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 NCF2-203ENST00000413720 2276 ntTSL 2 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 POLR2M-202ENST00000380557 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 APLNR-202ENST00000606794 3609 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AC004877.1-201ENST00000608963 4093 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 EIF1B-AS1-205ENST00000629723 2399 ntTSL 3 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 CALD1-203ENST00000393118 4281 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 COL14A1-201ENST00000247781 3450 ntTSL 5 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 ATP1A3-209ENST00000602133 3458 ntTSL 2 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 TWF1-211ENST00000552521 3012 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AGBL2-203ENST00000525123 3577 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 TP53AIP1-206ENST00000602346 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 CALCR-201ENST00000359558 3696 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 ARL1-201ENST00000261636 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 AC093909.5-201ENST00000621839 1799 ntBASIC9.58□□□□□ -0.88
CHRDL2Q6WN34 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 ADAMTS12-201ENST00000352040 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 EFHC1-213ENST00000635996 2548 ntTSL 5 BASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 NBPF14-205ENST00000614329 2051 ntTSL 5 BASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 NBPF14-207ENST00000616120 2051 ntTSL 5 BASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 BTN2A2-203ENST00000416795 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 CUL2-204ENST00000374751 4233 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 TRPV3-205ENST00000572519 2937 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 RHOH-201ENST00000381799 4305 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 WTAP-202ENST00000358372 3656 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 TTC31-201ENST00000233623 3235 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 GNAS-208ENST00000371075 2551 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 AC026362.2-201ENST00000624878 5566 ntBASIC9.57□□□□□ -0.88
CHRDL2Q6WN34 SLFN11-201ENST00000308377 4910 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms