Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.21□□□□□ -1.42
MTHFRP42898 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MTHFRP42898 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.21□□□□□ -1.42
MTHFRP42898 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.21□□□□□ -1.42
MTHFRP42898 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.21□□□□□ -1.42
MTHFRP42898 OR6M2P-201ENST00000529831 871 ntBASIC6.21□□□□□ -1.42
MTHFRP42898 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
MTHFRP42898 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.21□□□□□ -1.42
MTHFRP42898 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MTHFRP42898 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.21□□□□□ -1.42
MTHFRP42898 AL139099.4-201ENST00000614802 114 ntBASIC6.21□□□□□ -1.42
MTHFRP42898 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.21□□□□□ -1.42
MTHFRP42898 AC073869.7-201ENST00000640874 297 ntBASIC6.21□□□□□ -1.42
MTHFRP42898 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MTHFRP42898 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
MTHFRP42898 AC109780.1-201ENST00000451768 1344 ntBASIC6.21□□□□□ -1.42
MTHFRP42898 AC235565.1-201ENST00000456962 1325 ntBASIC6.21□□□□□ -1.42
MTHFRP42898 AP001541.1-201ENST00000623322 1904 ntBASIC6.21□□□□□ -1.42
MTHFRP42898 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.21□□□□□ -1.42
MTHFRP42898 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
MTHFRP42898 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MTHFRP42898 AC007159.1-201ENST00000566529 4706 ntBASIC6.2□□□□□ -1.42
MTHFRP42898 CASC19-248ENST00000641674 1356 ntBASIC6.2□□□□□ -1.42
MTHFRP42898 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MTHFRP42898 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.2□□□□□ -1.42
MTHFRP42898 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MTHFRP42898 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MTHFRP42898 AL513548.1-201ENST00000562904 1724 ntBASIC6.2□□□□□ -1.42
MTHFRP42898 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
MTHFRP42898 RNA5SP443-201ENST00000363083 132 ntBASIC6.2□□□□□ -1.42
MTHFRP42898 SNORA70.9-201ENST00000384370 135 ntBASIC6.2□□□□□ -1.42
MTHFRP42898 AC007068.1-201ENST00000396690 844 ntBASIC6.2□□□□□ -1.42
MTHFRP42898 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.2□□□□□ -1.42
MTHFRP42898 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.2□□□□□ -1.42
MTHFRP42898 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.2□□□□□ -1.42
MTHFRP42898 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.2□□□□□ -1.42
MTHFRP42898 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.2□□□□□ -1.42
MTHFRP42898 HMGB3P24-201ENST00000433260 622 ntBASIC6.2□□□□□ -1.42
MTHFRP42898 FTLP19-201ENST00000433300 394 ntBASIC6.2□□□□□ -1.42
MTHFRP42898 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.2□□□□□ -1.42
MTHFRP42898 RPS17P15-201ENST00000475609 349 ntBASIC6.2□□□□□ -1.42
MTHFRP42898 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
MTHFRP42898 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.2□□□□□ -1.42
MTHFRP42898 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.2□□□□□ -1.42
MTHFRP42898 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.2□□□□□ -1.42
MTHFRP42898 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.2□□□□□ -1.42
MTHFRP42898 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.2□□□□□ -1.42
MTHFRP42898 OR10G5P-201ENST00000532733 358 ntBASIC6.2□□□□□ -1.42
MTHFRP42898 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.2□□□□□ -1.42
MTHFRP42898 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.2□□□□□ -1.42
MTHFRP42898 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.2□□□□□ -1.42
MTHFRP42898 RNU4ATAC-201ENST00000580972 127 ntBASIC6.2□□□□□ -1.42
MTHFRP42898 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MTHFRP42898 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.2□□□□□ -1.42
MTHFRP42898 AC010615.3-201ENST00000597319 394 ntBASIC6.2□□□□□ -1.42
MTHFRP42898 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.2□□□□□ -1.42
MTHFRP42898 AC008115.3-201ENST00000614874 549 ntBASIC6.2□□□□□ -1.42
MTHFRP42898 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MTHFRP42898 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MTHFRP42898 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
MTHFRP42898 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MTHFRP42898 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
MTHFRP42898 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MTHFRP42898 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
MTHFRP42898 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.2□□□□□ -1.42
MTHFRP42898 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MTHFRP42898 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.19□□□□□ -1.42
MTHFRP42898 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MTHFRP42898 AC125336.1-201ENST00000508893 2827 ntBASIC6.19□□□□□ -1.42
MTHFRP42898 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
MTHFRP42898 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
MTHFRP42898 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MTHFRP42898 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MTHFRP42898 MRPL53P1-201ENST00000414323 319 ntBASIC6.19□□□□□ -1.42
MTHFRP42898 OR6E1P-201ENST00000414424 923 ntBASIC6.19□□□□□ -1.42
MTHFRP42898 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.19□□□□□ -1.42
MTHFRP42898 RPS17P17-201ENST00000419392 409 ntBASIC6.19□□□□□ -1.42
MTHFRP42898 TRGV7-201ENST00000427089 353 ntBASIC6.19□□□□□ -1.42
MTHFRP42898 RPS7P3-201ENST00000443360 580 ntBASIC6.19□□□□□ -1.42
MTHFRP42898 AC104164.1-201ENST00000460282 590 ntBASIC6.19□□□□□ -1.42
MTHFRP42898 RPS23P6-201ENST00000466136 431 ntBASIC6.19□□□□□ -1.42
MTHFRP42898 RN7SL165P-201ENST00000477476 291 ntBASIC6.19□□□□□ -1.42
MTHFRP42898 RN7SL30P-201ENST00000488416 306 ntBASIC6.19□□□□□ -1.42
MTHFRP42898 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.19□□□□□ -1.42
MTHFRP42898 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.19□□□□□ -1.42
MTHFRP42898 HMGB1P42-201ENST00000532126 553 ntBASIC6.19□□□□□ -1.42
MTHFRP42898 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.19□□□□□ -1.42
MTHFRP42898 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.19□□□□□ -1.42
MTHFRP42898 MIR4260-201ENST00000583107 67 ntBASIC6.19□□□□□ -1.42
MTHFRP42898 AC007204.2-201ENST00000615022 616 ntBASIC6.19□□□□□ -1.42
MTHFRP42898 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.19□□□□□ -1.42
MTHFRP42898 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.19□□□□□ -1.42
MTHFRP42898 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.19□□□□□ -1.42
MTHFRP42898 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.19□□□□□ -1.42
MTHFRP42898 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.19□□□□□ -1.42
MTHFRP42898 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
MTHFRP42898 CR382285.2-201ENST00000624662 1495 ntBASIC6.19□□□□□ -1.42
MTHFRP42898 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.19□□□□□ -1.42
MTHFRP42898 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MTHFRP42898 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms