RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 DCAF8L2P0C7V8 631 aa10.55□□□□□ -0.72
PGBD4-201ENST00000397766 NISCHQ9Y2I1 1504 aa10.12□□□□□ -0.79
PGBD4-201ENST00000397766 SUPT5HO00267 1087 aaKnown RBP10.03□□□□□ -0.8
PGBD4-201ENST00000397766 PELP1Q8IZL8 1130 aaKnown RBP9.96□□□□□ -0.81
PGBD4-201ENST00000397766 APLP2Q06481 763 aa9.8□□□□□ -0.84
PGBD4-201ENST00000397766 SHROOM4Q9ULL8 1493 aa9.79□□□□□ -0.84
PGBD4-201ENST00000397766 FAM9AQ8IZU1 332 aaPredicted RBP9.76□□□□□ -0.85
PGBD4-201ENST00000397766 EHMT2Q96KQ7 1210 aa9.61□□□□□ -0.87
PGBD4-201ENST00000397766 ZEB1P37275 1124 aaPredicted RBP9.54□□□□□ -0.88
PGBD4-201ENST00000397766 CCER1Q8TC90 406 aaPredicted RBP9.51□□□□□ -0.89
PGBD4-201ENST00000397766 CENPBP07199 599 aaPredicted RBP9.48□□□□□ -0.89
PGBD4-201ENST00000397766 ERICH6Q7L0X2 663 aa9.44□□□□□ -0.9
PGBD4-201ENST00000397766 TRIM41Q8WV44 630 aa9.4□□□□□ -0.91
PGBD4-201ENST00000397766 PCGF6Q9BYE7 350 aa9.38□□□□□ -0.91
PGBD4-201ENST00000397766 TTBK1Q5TCY1 1321 aaPredicted RBP9.33□□□□□ -0.92
PGBD4-201ENST00000397766 NEFLP07196 543 aa9.3□□□□□ -0.92
PGBD4-201ENST00000397766 UBTFP17480 764 aaKnown RBP9.29□□□□□ -0.92
PGBD4-201ENST00000397766 ATP1B4Q9UN42 357 aaPredicted RBP9.29□□□□□ -0.92
PGBD4-201ENST00000397766 MYT1Q01538 1121 aa9.28□□□□□ -0.92
PGBD4-201ENST00000397766 RANGAP1P46060 587 aaPredicted RBP9.27□□□□□ -0.93
PGBD4-201ENST00000397766 TRIM26Q12899 539 aaPredicted RBP9.12□□□□□ -0.95
PGBD4-201ENST00000397766 YTHDC1Q96MU7 727 aaKnown RBP9.07□□□□□ -0.96
PGBD4-201ENST00000397766 DAXXQ9UER7 740 aaPredicted RBP9.06□□□□□ -0.96
PGBD4-201ENST00000397766 MYT1LQ9UL68 1186 aa9.06□□□□□ -0.96
PGBD4-201ENST00000397766 ABCC9O60706 1549 aa9.02□□□□□ -0.96
PGBD4-201ENST00000397766 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9□□□□□ -0.97
PGBD4-201ENST00000397766 HNRNPUL2Q1KMD3 747 aaKnown RBP9□□□□□ -0.97
PGBD4-201ENST00000397766 HRCP23327 699 aa8.95□□□□□ -0.98
PGBD4-201ENST00000397766 PPARGC1BQ86YN6 1023 aaKnown RBP8.92□□□□□ -0.98
PGBD4-201ENST00000397766 ITGAEP38570 1179 aa8.92□□□□□ -0.98
PGBD4-201ENST00000397766 POLR3GLQ9BT43 218 aa8.92□□□□□ -0.98
PGBD4-201ENST00000397766 CHIC1Q5VXU3 224 aa8.88□□□□□ -0.99
PGBD4-201ENST00000397766 PABPN1Q86U42 306 aaKnown RBP eCLIP8.85□□□□□ -0.99
PGBD4-201ENST00000397766 ZNF316A6NFI3 1004 aaPredicted RBP8.84□□□□□ -0.99
PGBD4-201ENST00000397766 RTL5Q5HYW3 569 aaPredicted RBP8.83□□□□□ -1
PGBD4-201ENST00000397766 SLC4A1APQ9BWU0 796 aaKnown RBP8.8□□□□□ -1
PGBD4-201ENST00000397766 LOC105371045A0A1W2PR82 267 aa8.79□□□□□ -1
PGBD4-201ENST00000397766 CLSPNQ9HAW4 1339 aa8.79□□□□□ -1
PGBD4-201ENST00000397766 FAM50AQ14320 339 aaKnown RBP8.77□□□□□ -1
PGBD4-201ENST00000397766 DIEXFQ68CQ4 756 aaKnown RBP8.77□□□□□ -1.01
PGBD4-201ENST00000397766 TRIM52Q96A61 297 aa8.76□□□□□ -1.01
PGBD4-201ENST00000397766 FBLN2P98095 1184 aa8.74□□□□□ -1.01
PGBD4-201ENST00000397766 ANP32CO43423 234 aa8.71□□□□□ -1.01
PGBD4-201ENST00000397766 ZBTB47Q9UFB7 747 aaPredicted RBP8.71□□□□□ -1.01
PGBD4-201ENST00000397766 CNGB1Q14028 1251 aaPredicted RBP8.7□□□□□ -1.02
PGBD4-201ENST00000397766 NEUROD1Q13562 356 aa8.66□□□□□ -1.02
PGBD4-201ENST00000397766 CDK11AQ9UQ88 783 aaPredicted RBP8.66□□□□□ -1.02
PGBD4-201ENST00000397766 NEFMP07197 916 aa8.65□□□□□ -1.02
PGBD4-201ENST00000397766 NPM1P06748 294 aaKnown RBP eCLIP8.64□□□□□ -1.03
PGBD4-201ENST00000397766 ESF1Q9H501 851 aaKnown RBP8.62□□□□□ -1.03
PGBD4-201ENST00000397766 CANXP27824 592 aaKnown RBP8.62□□□□□ -1.03
PGBD4-201ENST00000397766 ZNF326Q5BKZ1 582 aaKnown RBP8.6□□□□□ -1.03
PGBD4-201ENST00000397766 CSRNP3Q8WYN3 585 aa8.56□□□□□ -1.04
PGBD4-201ENST00000397766 BCANQ96GW7 911 aa8.56□□□□□ -1.04
PGBD4-201ENST00000397766 ANP32AP39687 249 aaKnown RBP8.54□□□□□ -1.04
PGBD4-201ENST00000397766 GTF3C3Q9Y5Q9 886 aa8.54□□□□□ -1.04
PGBD4-201ENST00000397766 PLPPR3Q6T4P5 718 aa8.51□□□□□ -1.05
PGBD4-201ENST00000397766 SLC24A1O60721 1099 aa8.49□□□□□ -1.05
PGBD4-201ENST00000397766 TONSLQ96HA7 1378 aa8.48□□□□□ -1.05
PGBD4-201ENST00000397766 ANP32BQ92688 251 aaKnown RBP8.47□□□□□ -1.05
PGBD4-201ENST00000397766 ZNF777Q9ULD5 760 aaPredicted RBP8.47□□□□□ -1.05
PGBD4-201ENST00000397766 RB1CC1Q8TDY2 1594 aa8.46□□□□□ -1.05
PGBD4-201ENST00000397766 ACIN1Q9UKV3 1341 aaKnown RBP8.46□□□□□ -1.05
PGBD4-201ENST00000397766 ERCC6Q03468 1493 aa8.46□□□□□ -1.05
PGBD4-201ENST00000397766 UPF2Q9HAU5 1272 aaKnown RBP8.45□□□□□ -1.06
PGBD4-201ENST00000397766 TRHP20396 242 aaPredicted RBP8.45□□□□□ -1.06
PGBD4-201ENST00000397766 P3H3Q8IVL6 736 aa8.45□□□□□ -1.06
PGBD4-201ENST00000397766 DCAF1Q9Y4B6 1507 aa8.43□□□□□ -1.06
PGBD4-201ENST00000397766 AEBP2Q6ZN18 517 aaPredicted RBP8.42□□□□□ -1.06
PGBD4-201ENST00000397766 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.42□□□□□ -1.06
PGBD4-201ENST00000397766 STAG3Q9UJ98 1225 aa8.42□□□□□ -1.06
PGBD4-201ENST00000397766 SCRIBQ14160 1630 aa8.41□□□□□ -1.06
PGBD4-201ENST00000397766 ARID3CA6NKF2 412 aa8.4□□□□□ -1.07
PGBD4-201ENST00000397766 HSP90AA1P07900 732 aaKnown RBP8.39□□□□□ -1.07
PGBD4-201ENST00000397766 ZCCHC6Q5VYS8 1495 aaKnown RBP8.39□□□□□ -1.07
PGBD4-201ENST00000397766 NPM2Q86SE8 214 aaKnown RBP8.36□□□□□ -1.07
PGBD4-201ENST00000397766 CHGAP10645 457 aaKnown RBP8.36□□□□□ -1.07
PGBD4-201ENST00000397766 BCL11AQ9H165 835 aa8.36□□□□□ -1.07
PGBD4-201ENST00000397766 CCDC180Q9P1Z9 1646 aa8.35□□□□□ -1.07
PGBD4-201ENST00000397766 WDR43Q15061 677 aaKnown RBP eCLIP8.35□□□□□ -1.07
PGBD4-201ENST00000397766 HNRNPUQ00839 825 aaKnown RBP eCLIP8.34□□□□□ -1.07
PGBD4-201ENST00000397766 FKBP8Q14318 412 aa8.34□□□□□ -1.07
PGBD4-201ENST00000397766 CHMP7Q8WUX9 453 aaPredicted RBP8.34□□□□□ -1.07
PGBD4-201ENST00000397766 TSPY4P0CV99 314 aa8.34□□□□□ -1.07
PGBD4-201ENST00000397766 TSPY10P0CW01 314 aa8.34□□□□□ -1.07
PGBD4-201ENST00000397766 EEA1Q15075 1411 aa8.33□□□□□ -1.08
PGBD4-201ENST00000397766 MYO15BQ96JP2 1530 aa8.33□□□□□ -1.08
PGBD4-201ENST00000397766 TMC1Q8TDI8 760 aa8.32□□□□□ -1.08
PGBD4-201ENST00000397766 MTUS2Q5JR59 1369 aa8.32□□□□□ -1.08
PGBD4-201ENST00000397766 RSF1Q96T23 1441 aaPredicted RBP8.32□□□□□ -1.08
PGBD4-201ENST00000397766 MYH16Q9H6N6 1097 aa8.31□□□□□ -1.08
PGBD4-201ENST00000397766 FAM9BQ8IZU0 186 aa8.31□□□□□ -1.08
PGBD4-201ENST00000397766 GLIPR1L2Q4G1C9 344 aa8.3□□□□□ -1.08
PGBD4-201ENST00000397766 CCDC136Q96JN2 1154 aa8.3□□□□□ -1.08
PGBD4-201ENST00000397766 ARID4BQ4LE39 1312 aaPredicted RBP8.3□□□□□ -1.08
PGBD4-201ENST00000397766 EIF5BO60841 1220 aaKnown RBP8.3□□□□□ -1.08
PGBD4-201ENST00000397766 DDX10Q13206 875 aaKnown RBP8.29□□□□□ -1.08
PGBD4-201ENST00000397766 CLIP1P30622 1438 aa8.28□□□□□ -1.08
PGBD4-201ENST00000397766 MRS2Q9HD23 443 aa8.27□□□□□ -1.09
PGBD4-201ENST00000397766 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms