RNA–Protein interactions for RNA: ENST00000053243.5

TNFRSF17-201, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 994 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-201ENST00000053243 AEBP2Q6ZN18 517 aaPredicted RBP19.91■□□□□ 0.78
TNFRSF17-201ENST00000053243 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
TNFRSF17-201ENST00000053243 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF17-201ENST00000053243 SENP3Q9H4L4 574 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF17-201ENST00000053243 PLPPR3Q6T4P5 718 aa15.79■□□□□ 0.12
TNFRSF17-201ENST00000053243 FOXD1Q16676 465 aa15.66■□□□□ 0.1
TNFRSF17-201ENST00000053243 PPP6R1Q9UPN7 881 aa15.1■□□□□ 0.01
TNFRSF17-201ENST00000053243 ADRA2BP18089 450 aa15.09■□□□□ 0.01
TNFRSF17-201ENST00000053243 PIAS4Q8N2W9 510 aaPredicted RBP14.79□□□□□ -0.04
TNFRSF17-201ENST00000053243 MSH5O43196 834 aa14.41□□□□□ -0.1
TNFRSF17-201ENST00000053243 NISCHQ9Y2I1 1504 aa14.32□□□□□ -0.12
TNFRSF17-201ENST00000053243 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
TNFRSF17-201ENST00000053243 PPP4R3CPQ6ZMV5 832 aa13.93□□□□□ -0.18
TNFRSF17-201ENST00000053243 SCAF1Q9H7N4 1312 aaKnown RBP13.75□□□□□ -0.21
TNFRSF17-201ENST00000053243 KCNA4P22459 653 aa13.69□□□□□ -0.22
TNFRSF17-201ENST00000053243 MAPK8IP2Q13387 824 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF17-201ENST00000053243 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
TNFRSF17-201ENST00000053243 CNKSR2Q8WXI2 1034 aa13.52□□□□□ -0.25
TNFRSF17-201ENST00000053243 DMRT2Q9Y5R5 561 aa13.47□□□□□ -0.25
TNFRSF17-201ENST00000053243 NPM3O75607 178 aaKnown RBP13.39□□□□□ -0.27
TNFRSF17-201ENST00000053243 RNF216Q9NWF9 866 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF17-201ENST00000053243 HOXD11P31277 338 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF17-201ENST00000053243 EHMT2Q96KQ7 1210 aa13.07□□□□□ -0.32
TNFRSF17-201ENST00000053243 SLC4A1APQ9BWU0 796 aaKnown RBP13.05□□□□□ -0.32
TNFRSF17-201ENST00000053243 DNAJC5BQ9UF47 199 aa12.93□□□□□ -0.34
TNFRSF17-201ENST00000053243 DCAF8L1A6NGE4 600 aa12.92□□□□□ -0.34
TNFRSF17-201ENST00000053243 CSRNP3Q8WYN3 585 aa12.83□□□□□ -0.36
TNFRSF17-201ENST00000053243 ZBTB22O15209 634 aa12.64□□□□□ -0.39
TNFRSF17-201ENST00000053243 SLC4A2P04920 1241 aa12.63□□□□□ -0.39
TNFRSF17-201ENST00000053243 CCDC180Q9P1Z9 1646 aa12.62□□□□□ -0.39
TNFRSF17-201ENST00000053243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.58□□□□□ -0.4
TNFRSF17-201ENST00000053243 FOXD4L1Q9NU39 408 aa12.55□□□□□ -0.4
TNFRSF17-201ENST00000053243 U3KPZ7 1027 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF17-201ENST00000053243 MYCNP04198 464 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF17-201ENST00000053243 RNF39Q9H2S5 420 aa12.36□□□□□ -0.43
TNFRSF17-201ENST00000053243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF17-201ENST00000053243 HNRNPUL2Q1KMD3 747 aaKnown RBP12.21□□□□□ -0.45
TNFRSF17-201ENST00000053243 C1QBPQ07021 282 aaKnown RBP12.19□□□□□ -0.46
TNFRSF17-201ENST00000053243 CACNB1Q02641 598 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF17-201ENST00000053243 SAMD1Q6SPF0 538 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF17-201ENST00000053243 ZCCHC6Q5VYS8 1495 aaKnown RBP12.1□□□□□ -0.47
TNFRSF17-201ENST00000053243 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
TNFRSF17-201ENST00000053243 APLP2Q06481 763 aa12.07□□□□□ -0.48
TNFRSF17-201ENST00000053243 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF17-201ENST00000053243 SPINK5Q9NQ38 1064 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF17-201ENST00000053243 CAPN15O75808 1086 aa12□□□□□ -0.49
TNFRSF17-201ENST00000053243 DCAF1Q9Y4B6 1507 aa11.97□□□□□ -0.49
TNFRSF17-201ENST00000053243 TRHP20396 242 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF17-201ENST00000053243 ZNF219Q9P2Y4 722 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF17-201ENST00000053243 MYO15BQ96JP2 1530 aa11.8□□□□□ -0.52
TNFRSF17-201ENST00000053243 ABCB7O75027 752 aa11.79□□□□□ -0.52
TNFRSF17-201ENST00000053243 DSG3P32926 999 aa11.78□□□□□ -0.52
TNFRSF17-201ENST00000053243 POLA2Q14181 598 aa11.74□□□□□ -0.53
TNFRSF17-201ENST00000053243 NACADO15069 1562 aa11.6□□□□□ -0.55
TNFRSF17-201ENST00000053243 ZBTB12Q9Y330 459 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF17-201ENST00000053243 MKRN4PQ13434 485 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF17-201ENST00000053243 FBLN2P98095 1184 aa11.52□□□□□ -0.57
TNFRSF17-201ENST00000053243 FKBP8Q14318 412 aa11.52□□□□□ -0.57
TNFRSF17-201ENST00000053243 SHROOM4Q9ULL8 1493 aa11.5□□□□□ -0.57
TNFRSF17-201ENST00000053243 ABCC9O60706 1549 aa11.45□□□□□ -0.58
TNFRSF17-201ENST00000053243 RB1CC1Q8TDY2 1594 aa11.45□□□□□ -0.58
TNFRSF17-201ENST00000053243 DCAF8L2P0C7V8 631 aa11.41□□□□□ -0.58
TNFRSF17-201ENST00000053243 SCRIBQ14160 1630 aa11.39□□□□□ -0.59
TNFRSF17-201ENST00000053243 OSCARQ8IYS5 282 aa11.39□□□□□ -0.59
TNFRSF17-201ENST00000053243 UNC13AQ9UPW8 1703 aa11.32□□□□□ -0.6
TNFRSF17-201ENST00000053243 SPDYE4A6NLX3 237 aa11.27□□□□□ -0.61
TNFRSF17-201ENST00000053243 SPDYE2BA6NHP3 402 aa11.22□□□□□ -0.61
TNFRSF17-201ENST00000053243 SPDYE6P0CI01 402 aa11.22□□□□□ -0.61
TNFRSF17-201ENST00000053243 SPDYE2Q495Y8 402 aa11.22□□□□□ -0.61
TNFRSF17-201ENST00000053243 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
TNFRSF17-201ENST00000053243 ZNF692Q9BU19 519 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF17-201ENST00000053243 SSUH2Q9Y2M2 353 aa11.16□□□□□ -0.62
TNFRSF17-201ENST00000053243 RTN4Q9NQC3 1192 aaKnown RBP11.13□□□□□ -0.63
TNFRSF17-201ENST00000053243 SUPT5HO00267 1087 aaKnown RBP11.12□□□□□ -0.63
TNFRSF17-201ENST00000053243 PROM2Q8N271 834 aa11.1□□□□□ -0.63
TNFRSF17-201ENST00000053243 RSF1Q96T23 1441 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF17-201ENST00000053243 BAZ1AQ9NRL2 1556 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF17-201ENST00000053243 BICRAQ9NZM4 1560 aa11.08□□□□□ -0.64
TNFRSF17-201ENST00000053243 AMER1Q5JTC6 1135 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF17-201ENST00000053243 PABPN1Q86U42 306 aaKnown RBP eCLIP11.07□□□□□ -0.64
TNFRSF17-201ENST00000053243 AKT1S1Q96B36 256 aa11.06□□□□□ -0.64
TNFRSF17-201ENST00000053243 SMARCA4P51532 1647 aa11.02□□□□□ -0.64
TNFRSF17-201ENST00000053243 MROH2BQ7Z745 1585 aa11.01□□□□□ -0.65
TNFRSF17-201ENST00000053243 CECR2Q9BXF3 1484 aa11□□□□□ -0.65
TNFRSF17-201ENST00000053243 REM2Q8IYK8 340 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF17-201ENST00000053243 WIZO95785 1651 aa10.98□□□□□ -0.65
TNFRSF17-201ENST00000053243 POTEHQ6S545 545 aa10.96□□□□□ -0.65
TNFRSF17-201ENST00000053243 FBXO3Q9UK99 471 aa10.96□□□□□ -0.65
TNFRSF17-201ENST00000053243 PEG3Q9GZU2 1588 aa10.95□□□□□ -0.66
TNFRSF17-201ENST00000053243 TOP2AP11388 1531 aaKnown RBP10.92□□□□□ -0.66
TNFRSF17-201ENST00000053243 SPDYE1Q8NFV5 336 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF17-201ENST00000053243 PITPNM1O00562 1244 aa10.88□□□□□ -0.67
TNFRSF17-201ENST00000053243 CLEC11AQ9Y240 323 aa10.87□□□□□ -0.67
TNFRSF17-201ENST00000053243 EIF4G1Q04637 1599 aaKnown RBP10.86□□□□□ -0.67
TNFRSF17-201ENST00000053243 VASPP50552 380 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF17-201ENST00000053243 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
TNFRSF17-201ENST00000053243 SMARCA2P51531 1590 aa10.81□□□□□ -0.68
TNFRSF17-201ENST00000053243 IFNLR1Q8IU57 520 aaPredicted RBP10.78□□□□□ -0.68
TNFRSF17-201ENST00000053243 PRR29P0C7W0 189 aa10.75□□□□□ -0.69
TNFRSF17-201ENST00000053243 CHRDL2Q6WN34 429 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms