Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 SOX5-212ENST00000541536 2365 ntTSL 2 BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 NDUFS1-202ENST00000423725 2631 ntTSL 2 BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL25A1Q9BXS0 ZNF195-203ENST00000343338 3145 ntAPPRIS ALT2 TSL 4 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 PABPC4L-201ENST00000421491 4944 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 NF1P1-201ENST00000604105 2645 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AC104966.1-201ENST00000467010 1464 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 CHODL-206ENST00000400135 2136 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 FLI1-202ENST00000344954 3427 ntTSL 2 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 DBF4B-201ENST00000315005 2997 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 Y_RNA.18-201ENST00000362461 102 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 TAF9BP1-201ENST00000396646 746 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 OR4K12P-201ENST00000406538 961 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 RN7SKP129-201ENST00000410288 299 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 RN7SKP279-201ENST00000411383 298 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 MTCO1P20-201ENST00000425366 358 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 TAAR7P-201ENST00000436141 242 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 MTND2P29-201ENST00000438595 412 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 COX4I1P2-201ENST00000447446 547 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 DHFRP3-201ENST00000455595 559 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 IGKV2D-38-201ENST00000518423 240 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 HIGD1AP5-201ENST00000529959 259 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AC027026.1-201ENST00000532323 742 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AL157687.1-201ENST00000554853 619 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AC074050.1-201ENST00000563247 211 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 MIR548AB-201ENST00000584917 84 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AC010487.1-201ENST00000594408 1172 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 7SK.7-201ENST00000603504 247 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AC124916.2-201ENST00000604416 224 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AC018816.2-201ENST00000621460 353 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AC119674.1-207ENST00000641355 633 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 CEACAM22P-201ENST00000446628 3016 ntTSL 2 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 MTND5P3-201ENST00000438536 1800 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 SMC1B-202ENST00000404354 3636 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AC009090.4-201ENST00000623921 3691 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 NLGN4X-208ENST00000538097 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms