Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 BIN2P1-201ENST00000504996 1530 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.37□□□□□ -1.39
UBE3AQ05086 AC092111.2-201ENST00000611627 1414 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
UBE3AQ05086 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
UBE3AQ05086 RNA5SP394-201ENST00000364216 119 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.37□□□□□ -1.39
UBE3AQ05086 OR1F12-201ENST00000402365 945 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 HMGB1P20-201ENST00000402555 677 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.37□□□□□ -1.39
UBE3AQ05086 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.37□□□□□ -1.39
UBE3AQ05086 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.37□□□□□ -1.39
UBE3AQ05086 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.37□□□□□ -1.39
UBE3AQ05086 AC013470.3-201ENST00000420252 1194 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 OR13K1P-201ENST00000444577 975 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
UBE3AQ05086 AC017099.1-201ENST00000448261 1028 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 RAB28P3-201ENST00000448325 597 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 RPS17P15-201ENST00000475609 349 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.37□□□□□ -1.39
UBE3AQ05086 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.37□□□□□ -1.39
UBE3AQ05086 AK4P6-201ENST00000505168 528 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.37□□□□□ -1.39
UBE3AQ05086 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.37□□□□□ -1.39
UBE3AQ05086 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.37□□□□□ -1.39
UBE3AQ05086 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.37□□□□□ -1.39
UBE3AQ05086 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.37□□□□□ -1.39
UBE3AQ05086 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
UBE3AQ05086 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.37□□□□□ -1.39
UBE3AQ05086 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.37□□□□□ -1.39
UBE3AQ05086 MIR3189-201ENST00000578735 73 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.37□□□□□ -1.39
UBE3AQ05086 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
UBE3AQ05086 AL683813.2-201ENST00000605245 502 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 OR51C1P-201ENST00000608504 942 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 AC079395.2-201ENST00000610982 737 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 AL035661.1-201ENST00000620459 1144 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 MIR6730-201ENST00000622213 67 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 AC020923.1-201ENST00000624021 917 ntBASIC6.37□□□□□ -1.39
UBE3AQ05086 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.37□□□□□ -1.39
UBE3AQ05086 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.37□□□□□ -1.39
UBE3AQ05086 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
UBE3AQ05086 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
UBE3AQ05086 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
UBE3AQ05086 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
UBE3AQ05086 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
UBE3AQ05086 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
UBE3AQ05086 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.37□□□□□ -1.39
UBE3AQ05086 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
UBE3AQ05086 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.37□□□□□ -1.39
UBE3AQ05086 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
UBE3AQ05086 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
UBE3AQ05086 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.36□□□□□ -1.39
UBE3AQ05086 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 AC053481.2-202ENST00000582394 1500 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 PARP4P1-201ENST00000435945 2337 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
UBE3AQ05086 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.36□□□□□ -1.39
UBE3AQ05086 GAPDHP24-201ENST00000328713 983 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.36□□□□□ -1.39
UBE3AQ05086 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
UBE3AQ05086 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
UBE3AQ05086 NPM1P4-201ENST00000414095 812 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 NMD3P2-201ENST00000421815 761 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 AC097721.1-201ENST00000427150 1253 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.36□□□□□ -1.39
UBE3AQ05086 AL445928.1-201ENST00000435545 222 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 Z84478.1-201ENST00000438230 1219 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
UBE3AQ05086 SBDSP1-204ENST00000453858 737 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 SIAH1P1-201ENST00000479411 923 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 AC099521.1-201ENST00000482557 334 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 AC008629.2-201ENST00000503783 483 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 DUTP7-201ENST00000507982 486 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 BX510359.5-201ENST00000515651 304 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.36□□□□□ -1.39
UBE3AQ05086 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.36□□□□□ -1.39
UBE3AQ05086 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.36□□□□□ -1.39
UBE3AQ05086 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.36□□□□□ -1.39
UBE3AQ05086 AC119403.2-201ENST00000590960 598 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.36□□□□□ -1.39
UBE3AQ05086 RNU6-84P-201ENST00000607737 102 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 AL021707.7-201ENST00000607991 416 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 AC241377.1-201ENST00000619797 406 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.36□□□□□ -1.39
UBE3AQ05086 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
UBE3AQ05086 CU639417.4-201ENST00000623928 207 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 AC087565.3-203ENST00000641018 837 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms