Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RHBDL3P58872 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RHBDL3P58872 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RHBDL3P58872 MIR323A-201ENST00000362199 86 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 RNA5SP211-201ENST00000365516 117 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.08□□□□□ -1.28
RHBDL3P58872 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.08□□□□□ -1.28
RHBDL3P58872 RN7SKP166-201ENST00000410812 305 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 RN7SKP29-201ENST00000410957 272 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 RN7SKP293-201ENST00000411389 296 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 SDHDP6-201ENST00000414693 480 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 MTCYBP7-201ENST00000419540 1134 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.08□□□□□ -1.28
RHBDL3P58872 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.08□□□□□ -1.28
RHBDL3P58872 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RHBDL3P58872 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.08□□□□□ -1.28
RHBDL3P58872 RPS23P6-201ENST00000466136 431 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 AC128716.1-201ENST00000475129 166 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 RPS17P15-201ENST00000475609 349 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 RPL23AP40-201ENST00000487630 390 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 AC096754.1-201ENST00000508904 818 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 AC067904.2-201ENST00000517322 1283 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 AC112191.2-201ENST00000522428 333 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.08□□□□□ -1.28
RHBDL3P58872 AC019131.2-201ENST00000609071 870 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.08□□□□□ -1.28
RHBDL3P58872 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.08□□□□□ -1.28
RHBDL3P58872 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RHBDL3P58872 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RHBDL3P58872 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC7.08□□□□□ -1.28
RHBDL3P58872 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
RHBDL3P58872 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
RHBDL3P58872 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
RHBDL3P58872 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.08□□□□□ -1.28
RHBDL3P58872 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RHBDL3P58872 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RHBDL3P58872 RLIMP2-201ENST00000427891 1563 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.07□□□□□ -1.28
RHBDL3P58872 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 AC005034.3-201ENST00000604845 1747 ntBASIC7.07□□□□□ -1.28
RHBDL3P58872 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.07□□□□□ -1.28
RHBDL3P58872 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.07□□□□□ -1.28
RHBDL3P58872 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
RHBDL3P58872 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.07□□□□□ -1.28
RHBDL3P58872 RNA5SP394-201ENST00000364216 119 ntBASIC7.07□□□□□ -1.28
RHBDL3P58872 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.07□□□□□ -1.28
RHBDL3P58872 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.07□□□□□ -1.28
RHBDL3P58872 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.07□□□□□ -1.28
RHBDL3P58872 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC7.07□□□□□ -1.28
RHBDL3P58872 AC126120.1-201ENST00000431082 470 ntBASIC7.07□□□□□ -1.28
RHBDL3P58872 FTLP19-201ENST00000433300 394 ntBASIC7.07□□□□□ -1.28
RHBDL3P58872 RAB28P2-201ENST00000454299 641 ntBASIC7.07□□□□□ -1.28
RHBDL3P58872 RN7SL352P-201ENST00000466002 277 ntBASIC7.07□□□□□ -1.28
RHBDL3P58872 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC7.07□□□□□ -1.28
RHBDL3P58872 CCDC11P1-201ENST00000503137 1162 ntBASIC7.07□□□□□ -1.28
RHBDL3P58872 NENFP3-201ENST00000503735 313 ntBASIC7.07□□□□□ -1.28
RHBDL3P58872 CYCSP22-201ENST00000517555 339 ntBASIC7.07□□□□□ -1.28
RHBDL3P58872 AC026688.1-201ENST00000520639 1168 ntBASIC7.07□□□□□ -1.28
RHBDL3P58872 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.07□□□□□ -1.28
RHBDL3P58872 DPPA2P4-201ENST00000563717 878 ntBASIC7.07□□□□□ -1.28
RHBDL3P58872 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.07□□□□□ -1.28
RHBDL3P58872 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.07□□□□□ -1.28
RHBDL3P58872 AC004477.3-201ENST00000614061 590 ntBASIC7.07□□□□□ -1.28
RHBDL3P58872 AC022467.1-201ENST00000614738 749 ntBASIC7.07□□□□□ -1.28
RHBDL3P58872 OR11H2-202ENST00000641517 1085 ntBASIC7.07□□□□□ -1.28
RHBDL3P58872 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.07□□□□□ -1.28
RHBDL3P58872 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
RHBDL3P58872 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RHBDL3P58872 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RHBDL3P58872 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RHBDL3P58872 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.06□□□□□ -1.28
RHBDL3P58872 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RHBDL3P58872 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RHBDL3P58872 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
RHBDL3P58872 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.06□□□□□ -1.28
RHBDL3P58872 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RHBDL3P58872 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RHBDL3P58872 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.06□□□□□ -1.28
RHBDL3P58872 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RHBDL3P58872 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RHBDL3P58872 SNORD8-201ENST00000363915 110 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RHBDL3P58872 GSTA12P-201ENST00000402398 508 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 HMGB1P20-201ENST00000402555 677 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms