RNA–Protein interactions for RNA: ENST00000458420.7

CLSTN2-201, Transcript of calsyntenin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLSTN2, Length 14,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN2-201ENST00000458420 DCAF8L2P0C7V8 631 aa12.87□□□□□ -0.35
CLSTN2-201ENST00000458420 EHMT2Q96KQ7 1210 aa11.93□□□□□ -0.5
CLSTN2-201ENST00000458420 SUPT5HO00267 1087 aaKnown RBP11.49□□□□□ -0.57
CLSTN2-201ENST00000458420 TTBK1Q5TCY1 1321 aaPredicted RBP11.4□□□□□ -0.58
CLSTN2-201ENST00000458420 RANGAP1P46060 587 aaPredicted RBP11.39□□□□□ -0.59
CLSTN2-201ENST00000458420 ATP1B4Q9UN42 357 aaPredicted RBP11.35□□□□□ -0.59
CLSTN2-201ENST00000458420 FAM9AQ8IZU1 332 aaPredicted RBP11.34□□□□□ -0.59
CLSTN2-201ENST00000458420 SHROOM4Q9ULL8 1493 aa11.28□□□□□ -0.6
CLSTN2-201ENST00000458420 CHIC1Q5VXU3 224 aa11.25□□□□□ -0.61
CLSTN2-201ENST00000458420 APLP2Q06481 763 aa11.21□□□□□ -0.62
CLSTN2-201ENST00000458420 MYT1LQ9UL68 1186 aa11.2□□□□□ -0.62
CLSTN2-201ENST00000458420 PELP1Q8IZL8 1130 aaKnown RBP11.03□□□□□ -0.64
CLSTN2-201ENST00000458420 ERICH6Q7L0X2 663 aa10.94□□□□□ -0.66
CLSTN2-201ENST00000458420 SLC4A1APQ9BWU0 796 aaKnown RBP10.88□□□□□ -0.67
CLSTN2-201ENST00000458420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.88□□□□□ -0.67
CLSTN2-201ENST00000458420 HNRNPUL2Q1KMD3 747 aaKnown RBP10.88□□□□□ -0.67
CLSTN2-201ENST00000458420 CNGB1Q14028 1251 aaPredicted RBP10.85□□□□□ -0.67
CLSTN2-201ENST00000458420 POLR3GLQ9BT43 218 aa10.84□□□□□ -0.67
CLSTN2-201ENST00000458420 PCGF6Q9BYE7 350 aa10.78□□□□□ -0.68
CLSTN2-201ENST00000458420 MYT1Q01538 1121 aa10.78□□□□□ -0.68
CLSTN2-201ENST00000458420 PLPPR3Q6T4P5 718 aa10.75□□□□□ -0.69
CLSTN2-201ENST00000458420 SLC24A1O60721 1099 aa10.66□□□□□ -0.7
CLSTN2-201ENST00000458420 UBTFP17480 764 aaKnown RBP10.65□□□□□ -0.7
CLSTN2-201ENST00000458420 ITGAEP38570 1179 aa10.62□□□□□ -0.71
CLSTN2-201ENST00000458420 CCER1Q8TC90 406 aaPredicted RBP10.6□□□□□ -0.71
CLSTN2-201ENST00000458420 PPARGC1BQ86YN6 1023 aaKnown RBP10.59□□□□□ -0.71
CLSTN2-201ENST00000458420 YTHDC1Q96MU7 727 aaKnown RBP10.59□□□□□ -0.71
CLSTN2-201ENST00000458420 BCL11AQ9H165 835 aa10.58□□□□□ -0.72
CLSTN2-201ENST00000458420 BCANQ96GW7 911 aa10.58□□□□□ -0.72
CLSTN2-201ENST00000458420 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
CLSTN2-201ENST00000458420 NEFLP07196 543 aa10.45□□□□□ -0.74
CLSTN2-201ENST00000458420 FBLN2P98095 1184 aa10.43□□□□□ -0.74
CLSTN2-201ENST00000458420 TRIM41Q8WV44 630 aa10.43□□□□□ -0.74
CLSTN2-201ENST00000458420 A0A0G2JS52 829 aa10.4□□□□□ -0.74
CLSTN2-201ENST00000458420 PLEKHG5O94827 1062 aa10.35□□□□□ -0.75
CLSTN2-201ENST00000458420 SCAF1Q9H7N4 1312 aaKnown RBP10.35□□□□□ -0.75
CLSTN2-201ENST00000458420 CLSPNQ9HAW4 1339 aa10.33□□□□□ -0.76
CLSTN2-201ENST00000458420 SENP3Q9H4L4 574 aaPredicted RBP10.29□□□□□ -0.76
CLSTN2-201ENST00000458420 CENPBP07199 599 aaPredicted RBP10.29□□□□□ -0.76
CLSTN2-201ENST00000458420 ARID3CA6NKF2 412 aa10.23□□□□□ -0.77
CLSTN2-201ENST00000458420 NISCHQ9Y2I1 1504 aa10.23□□□□□ -0.77
CLSTN2-201ENST00000458420 ESF1Q9H501 851 aaKnown RBP10.22□□□□□ -0.77
CLSTN2-201ENST00000458420 ZNF316A6NFI3 1004 aaPredicted RBP10.2□□□□□ -0.78
CLSTN2-201ENST00000458420 ZNF326Q5BKZ1 582 aaKnown RBP10.19□□□□□ -0.78
CLSTN2-201ENST00000458420 TRIM52Q96A61 297 aa10.18□□□□□ -0.78
CLSTN2-201ENST00000458420 ZBTB47Q9UFB7 747 aaPredicted RBP10.16□□□□□ -0.78
CLSTN2-201ENST00000458420 STAG3Q9UJ98 1225 aa10.15□□□□□ -0.78
CLSTN2-201ENST00000458420 PABPN1Q86U42 306 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLSTN2-201ENST00000458420 ZBTB7CA1YPR0 619 aa10.13□□□□□ -0.79
CLSTN2-201ENST00000458420 FAM50AQ14320 339 aaKnown RBP10.12□□□□□ -0.79
CLSTN2-201ENST00000458420 CHGAP10645 457 aaKnown RBP10.11□□□□□ -0.79
CLSTN2-201ENST00000458420 TULP1O00294 542 aaPredicted RBP10.09□□□□□ -0.79
CLSTN2-201ENST00000458420 NEUROD1Q13562 356 aa10.05□□□□□ -0.8
CLSTN2-201ENST00000458420 NCBP3Q53F19 620 aaKnown RBP10.03□□□□□ -0.8
CLSTN2-201ENST00000458420 NEFMP07197 916 aa10.03□□□□□ -0.8
CLSTN2-201ENST00000458420 ZNF777Q9ULD5 760 aaPredicted RBP10.02□□□□□ -0.81
CLSTN2-201ENST00000458420 CANXP27824 592 aaKnown RBP10.01□□□□□ -0.81
CLSTN2-201ENST00000458420 C14orf37Q86TY3 774 aa9.99□□□□□ -0.81
CLSTN2-201ENST00000458420 HAP1P54257 671 aaPredicted RBP9.98□□□□□ -0.81
CLSTN2-201ENST00000458420 ARXQ96QS3 562 aa9.97□□□□□ -0.81
CLSTN2-201ENST00000458420 P3H3Q8IVL6 736 aa9.96□□□□□ -0.81
CLSTN2-201ENST00000458420 ZEB1P37275 1124 aaPredicted RBP9.94□□□□□ -0.82
CLSTN2-201ENST00000458420 TRHP20396 242 aaPredicted RBP9.94□□□□□ -0.82
CLSTN2-201ENST00000458420 RTL5Q5HYW3 569 aaPredicted RBP9.92□□□□□ -0.82
CLSTN2-201ENST00000458420 NPM1P06748 294 aaKnown RBP eCLIP9.92□□□□□ -0.82
CLSTN2-201ENST00000458420 NPHP1O15259 732 aa9.91□□□□□ -0.82
CLSTN2-201ENST00000458420 ARID4BQ4LE39 1312 aaPredicted RBP9.89□□□□□ -0.83
CLSTN2-201ENST00000458420 NPM2Q86SE8 214 aaKnown RBP9.89□□□□□ -0.83
CLSTN2-201ENST00000458420 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.84□□□□□ -0.83
CLSTN2-201ENST00000458420 TAOK2Q9UL54 1235 aa9.83□□□□□ -0.84
CLSTN2-201ENST00000458420 LMOD2Q6P5Q4 547 aa9.81□□□□□ -0.84
CLSTN2-201ENST00000458420 LOC105371045A0A1W2PR82 267 aa9.8□□□□□ -0.84
CLSTN2-201ENST00000458420 SALL2Q9Y467 1007 aaPredicted RBP9.78□□□□□ -0.84
CLSTN2-201ENST00000458420 CDK11BP21127 795 aaKnown RBP9.77□□□□□ -0.85
CLSTN2-201ENST00000458420 CDK11AQ9UQ88 783 aaPredicted RBP9.77□□□□□ -0.85
CLSTN2-201ENST00000458420 ABCC9O60706 1549 aa9.77□□□□□ -0.85
CLSTN2-201ENST00000458420 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.76□□□□□ -0.85
CLSTN2-201ENST00000458420 AEBP2Q6ZN18 517 aaPredicted RBP9.76□□□□□ -0.85
CLSTN2-201ENST00000458420 HSP90AA1P07900 732 aaKnown RBP9.75□□□□□ -0.85
CLSTN2-201ENST00000458420 TRIM26Q12899 539 aaPredicted RBP9.72□□□□□ -0.85
CLSTN2-201ENST00000458420 TPRNQ4KMQ1 711 aa9.71□□□□□ -0.85
CLSTN2-201ENST00000458420 PPP1R15AO75807 674 aaPredicted RBP9.68□□□□□ -0.86
CLSTN2-201ENST00000458420 KCNH8Q96L42 1107 aa9.67□□□□□ -0.86
CLSTN2-201ENST00000458420 AMER1Q5JTC6 1135 aaPredicted RBP9.66□□□□□ -0.86
CLSTN2-201ENST00000458420 ANP32CO43423 234 aa9.66□□□□□ -0.86
CLSTN2-201ENST00000458420 CLSTN1O94985 981 aa9.66□□□□□ -0.86
CLSTN2-201ENST00000458420 PHF23Q9BUL5 403 aaPredicted RBP9.64□□□□□ -0.87
CLSTN2-201ENST00000458420 PPM1GO15355 546 aaPredicted RBP9.63□□□□□ -0.87
CLSTN2-201ENST00000458420 KDM2AQ9Y2K7 1162 aa9.62□□□□□ -0.87
CLSTN2-201ENST00000458420 ISY1Q9ULR0 285 aaKnown RBP9.62□□□□□ -0.87
CLSTN2-201ENST00000458420 MLECQ14165 292 aa9.61□□□□□ -0.87
CLSTN2-201ENST00000458420 CCDC9Q9Y3X0 531 aaKnown RBP9.61□□□□□ -0.87
CLSTN2-201ENST00000458420 PRM3Q9NNZ6 103 aa9.59□□□□□ -0.87
CLSTN2-201ENST00000458420 DIEXFQ68CQ4 756 aaKnown RBP9.58□□□□□ -0.88
CLSTN2-201ENST00000458420 HRCP23327 699 aa9.58□□□□□ -0.88
CLSTN2-201ENST00000458420 CHIC2Q9UKJ5 165 aa9.58□□□□□ -0.88
CLSTN2-201ENST00000458420 ANP32BQ92688 251 aaKnown RBP9.57□□□□□ -0.88
CLSTN2-201ENST00000458420 SOX12O15370 315 aa9.56□□□□□ -0.88
CLSTN2-201ENST00000458420 KLHL34Q8N239 644 aa9.54□□□□□ -0.88
CLSTN2-201ENST00000458420 KRI1Q8N9T8 703 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms