RNA–Protein interactions for RNA: ENST00000410957.1

RN7SKP29-201, Transcript of RNA, 7SK small nuclear pseudogene 29, humanhuman

BASIC

Gene RN7SKP29, Length 272 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP29-201ENST00000410957 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
RN7SKP29-201ENST00000410957 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.81
RN7SKP29-201ENST00000410957 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
RN7SKP29-201ENST00000410957 PHF23Q9BUL5 403 aaPredicted RBP17.71■□□□□ 0.43
RN7SKP29-201ENST00000410957 FOXD1Q16676 465 aa16.62■□□□□ 0.25
RN7SKP29-201ENST00000410957 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
RN7SKP29-201ENST00000410957 PPP6R1Q9UPN7 881 aa15.76■□□□□ 0.11
RN7SKP29-201ENST00000410957 ADRA2BP18089 450 aa15.68■□□□□ 0.1
RN7SKP29-201ENST00000410957 PIAS4Q8N2W9 510 aaPredicted RBP15.5■□□□□ 0.07
RN7SKP29-201ENST00000410957 MSH5O43196 834 aa15.34■□□□□ 0.05
RN7SKP29-201ENST00000410957 POTEDQ86YR6 584 aa14.71□□□□□ -0.05
RN7SKP29-201ENST00000410957 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
RN7SKP29-201ENST00000410957 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
RN7SKP29-201ENST00000410957 PPP4R3CPQ6ZMV5 832 aa14.17□□□□□ -0.14
RN7SKP29-201ENST00000410957 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
RN7SKP29-201ENST00000410957 NISCHQ9Y2I1 1504 aa13.94□□□□□ -0.18
RN7SKP29-201ENST00000410957 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
RN7SKP29-201ENST00000410957 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
RN7SKP29-201ENST00000410957 RNF216Q9NWF9 866 aaPredicted RBP13.66□□□□□ -0.22
RN7SKP29-201ENST00000410957 NCBP3Q53F19 620 aaKnown RBP13.6□□□□□ -0.23
RN7SKP29-201ENST00000410957 NPM3O75607 178 aaKnown RBP13.52□□□□□ -0.25
RN7SKP29-201ENST00000410957 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
RN7SKP29-201ENST00000410957 KCNA4P22459 653 aa13.47□□□□□ -0.25
RN7SKP29-201ENST00000410957 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
RN7SKP29-201ENST00000410957 DNAJC5BQ9UF47 199 aa13.18□□□□□ -0.3
RN7SKP29-201ENST00000410957 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
RN7SKP29-201ENST00000410957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.33
RN7SKP29-201ENST00000410957 C1QBPQ07021 282 aaKnown RBP12.96□□□□□ -0.33
RN7SKP29-201ENST00000410957 SLC4A2P04920 1241 aa12.9□□□□□ -0.34
RN7SKP29-201ENST00000410957 U3KPZ7 1027 aaPredicted RBP12.85□□□□□ -0.35
RN7SKP29-201ENST00000410957 SLC4A1APQ9BWU0 796 aaKnown RBP12.69□□□□□ -0.38
RN7SKP29-201ENST00000410957 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
RN7SKP29-201ENST00000410957 CAPN15O75808 1086 aa12.49□□□□□ -0.41
RN7SKP29-201ENST00000410957 ZBTB22O15209 634 aa12.44□□□□□ -0.42
RN7SKP29-201ENST00000410957 DSG3P32926 999 aa12.43□□□□□ -0.42
RN7SKP29-201ENST00000410957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.42□□□□□ -0.42
RN7SKP29-201ENST00000410957 MYCNP04198 464 aaPredicted RBP12.42□□□□□ -0.42
RN7SKP29-201ENST00000410957 HNRNPUL2Q1KMD3 747 aaKnown RBP12.42□□□□□ -0.42
RN7SKP29-201ENST00000410957 FOXD4L1Q9NU39 408 aa12.42□□□□□ -0.42
RN7SKP29-201ENST00000410957 SAMD1Q6SPF0 538 aaPredicted RBP12.39□□□□□ -0.43
RN7SKP29-201ENST00000410957 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
RN7SKP29-201ENST00000410957 APLP2Q06481 763 aa12.32□□□□□ -0.44
RN7SKP29-201ENST00000410957 ZNF219Q9P2Y4 722 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP29-201ENST00000410957 CCDC180Q9P1Z9 1646 aa12.27□□□□□ -0.44
RN7SKP29-201ENST00000410957 ABCB7O75027 752 aa12.26□□□□□ -0.45
RN7SKP29-201ENST00000410957 ATF5Q9Y2D1 282 aaPredicted RBP12.26□□□□□ -0.45
RN7SKP29-201ENST00000410957 POLA2Q14181 598 aa12.11□□□□□ -0.47
RN7SKP29-201ENST00000410957 CSRNP3Q8WYN3 585 aa12.04□□□□□ -0.48
RN7SKP29-201ENST00000410957 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
RN7SKP29-201ENST00000410957 ABCC9O60706 1549 aa11.96□□□□□ -0.5
RN7SKP29-201ENST00000410957 EHMT2Q96KQ7 1210 aa11.93□□□□□ -0.5
RN7SKP29-201ENST00000410957 ZBTB12Q9Y330 459 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP29-201ENST00000410957 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
RN7SKP29-201ENST00000410957 OSCARQ8IYS5 282 aa11.7□□□□□ -0.54
RN7SKP29-201ENST00000410957 MKRN4PQ13434 485 aaPredicted RBP11.69□□□□□ -0.54
RN7SKP29-201ENST00000410957 DCAF8L2P0C7V8 631 aa11.66□□□□□ -0.54
RN7SKP29-201ENST00000410957 ZCCHC6Q5VYS8 1495 aaKnown RBP11.63□□□□□ -0.55
RN7SKP29-201ENST00000410957 FBLN2P98095 1184 aa11.58□□□□□ -0.56
RN7SKP29-201ENST00000410957 AKT1S1Q96B36 256 aa11.57□□□□□ -0.56
RN7SKP29-201ENST00000410957 POTEHQ6S545 545 aa11.54□□□□□ -0.56
RN7SKP29-201ENST00000410957 NACADO15069 1562 aa11.52□□□□□ -0.57
RN7SKP29-201ENST00000410957 REM2Q8IYK8 340 aaPredicted RBP11.51□□□□□ -0.57
RN7SKP29-201ENST00000410957 RB1CC1Q8TDY2 1594 aa11.5□□□□□ -0.57
RN7SKP29-201ENST00000410957 DCAF1Q9Y4B6 1507 aa11.5□□□□□ -0.57
RN7SKP29-201ENST00000410957 SPDYE2BA6NHP3 402 aa11.48□□□□□ -0.57
RN7SKP29-201ENST00000410957 SPDYE6P0CI01 402 aa11.48□□□□□ -0.57
RN7SKP29-201ENST00000410957 SPDYE2Q495Y8 402 aa11.48□□□□□ -0.57
RN7SKP29-201ENST00000410957 MYO15BQ96JP2 1530 aa11.48□□□□□ -0.57
RN7SKP29-201ENST00000410957 CHRDL2Q6WN34 429 aa11.47□□□□□ -0.57
RN7SKP29-201ENST00000410957 SSUH2Q9Y2M2 353 aa11.4□□□□□ -0.58
RN7SKP29-201ENST00000410957 ZNF692Q9BU19 519 aaPredicted RBP11.39□□□□□ -0.59
RN7SKP29-201ENST00000410957 PITPNM1O00562 1244 aa11.38□□□□□ -0.59
RN7SKP29-201ENST00000410957 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
RN7SKP29-201ENST00000410957 UNC13AQ9UPW8 1703 aa11.28□□□□□ -0.6
RN7SKP29-201ENST00000410957 SCRIBQ14160 1630 aa11.27□□□□□ -0.6
RN7SKP29-201ENST00000410957 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.61
RN7SKP29-201ENST00000410957 PABPN1Q86U42 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
RN7SKP29-201ENST00000410957 SPDYE1Q8NFV5 336 aaPredicted RBP11.21□□□□□ -0.61
RN7SKP29-201ENST00000410957 CLEC11AQ9Y240 323 aa11.2□□□□□ -0.62
RN7SKP29-201ENST00000410957 BICRAQ9NZM4 1560 aa11.19□□□□□ -0.62
RN7SKP29-201ENST00000410957 SHROOM4Q9ULL8 1493 aa11.18□□□□□ -0.62
RN7SKP29-201ENST00000410957 SPDYE4A6NLX3 237 aa11.16□□□□□ -0.62
RN7SKP29-201ENST00000410957 PRKAR2AP13861 404 aaKnown RBP11.07□□□□□ -0.64
RN7SKP29-201ENST00000410957 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
RN7SKP29-201ENST00000410957 CHADLQ6NUI6 762 aa11.03□□□□□ -0.64
RN7SKP29-201ENST00000410957 PROM2Q8N271 834 aa10.99□□□□□ -0.65
RN7SKP29-201ENST00000410957 EVX2Q03828 476 aa10.98□□□□□ -0.65
RN7SKP29-201ENST00000410957 HAX1O00165 279 aa10.97□□□□□ -0.65
RN7SKP29-201ENST00000410957 SP7Q8TDD2 431 aaPredicted RBP10.91□□□□□ -0.66
RN7SKP29-201ENST00000410957 STAG3Q9UJ98 1225 aa10.91□□□□□ -0.66
RN7SKP29-201ENST00000410957 CREBZFQ9NS37 354 aa10.89□□□□□ -0.67
RN7SKP29-201ENST00000410957 CECR2Q9BXF3 1484 aa10.88□□□□□ -0.67
RN7SKP29-201ENST00000410957 C19orf67A6NJJ6 358 aa10.88□□□□□ -0.67
RN7SKP29-201ENST00000410957 EIF4G1Q04637 1599 aaKnown RBP10.86□□□□□ -0.67
RN7SKP29-201ENST00000410957 FARP1Q9Y4F1 1045 aaPredicted RBP10.86□□□□□ -0.67
RN7SKP29-201ENST00000410957 FKBP8Q14318 412 aa10.83□□□□□ -0.68
RN7SKP29-201ENST00000410957 CC2D2AQ9P2K1 1620 aa10.8□□□□□ -0.68
RN7SKP29-201ENST00000410957 MNX1P50219 401 aaPredicted RBP10.78□□□□□ -0.68
RN7SKP29-201ENST00000410957 MROH2BQ7Z745 1585 aa10.77□□□□□ -0.68
RN7SKP29-201ENST00000410957 SMARCA4P51532 1647 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms