Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 GCSHP5-201ENST00000443090 522 ntBASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 AL158047.1-201ENST00000445918 881 ntBASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 CDV3P1-201ENST00000471403 739 ntBASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 AC008403.3-201ENST00000598924 454 ntBASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 AC073648.6-201ENST00000641589 218 ntBASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
DDX49Q9Y6V7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.52■■□□□ 1.35
DDX49Q9Y6V7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 AC026366.1-201ENST00000488803 879 ntBASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
DDX49Q9Y6V7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 AC005332.7-201ENST00000614046 2005 ntBASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
DDX49Q9Y6V7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 MCRIP2P1-201ENST00000394346 511 ntBASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 AC007322.3-201ENST00000426526 701 ntBASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 AP003097.1-201ENST00000530657 1135 ntBASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX49Q9Y6V7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 412 ms