Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 PRORSD1P-201ENST00000295112 541 ntBASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 AC016405.3-201ENST00000607710 860 ntBASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LSM4Q9Y4Z0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.71■□□□□ 0.1
LSM4Q9Y4Z0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LSM4Q9Y4Z0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.71■□□□□ 0.1
LSM4Q9Y4Z0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
LSM4Q9Y4Z0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LSM4Q9Y4Z0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 BX276092.2-201ENST00000417668 665 ntBASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 AC093503.3-201ENST00000624917 2352 ntBASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LSM4Q9Y4Z0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms