Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 AC011484.1-201ENST00000377652 1995 ntBASIC19.22■□□□□ 0.67
SATB2Q9UPW6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 KRT18P35-201ENST00000510488 1269 ntBASIC19.21■□□□□ 0.67
SATB2Q9UPW6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
SATB2Q9UPW6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
SATB2Q9UPW6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 MIR6786-201ENST00000616843 113 ntBASIC19.2■□□□□ 0.66
SATB2Q9UPW6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SATB2Q9UPW6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 ARMC10P1-201ENST00000313754 855 ntBASIC19.19■□□□□ 0.66
SATB2Q9UPW6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SATB2Q9UPW6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms