Protein–RNA interactions for Protein: Q9UPR3

SMG5, Protein SMG5, humanhuman

Known RBP Predictions only

Length 1,016 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5Q9UPR3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMG5Q9UPR3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMG5Q9UPR3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SMG5Q9UPR3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMG5Q9UPR3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.64■□□□□ 0.9
SMG5Q9UPR3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SMG5Q9UPR3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
SMG5Q9UPR3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMG5Q9UPR3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMG5Q9UPR3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMG5Q9UPR3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMG5Q9UPR3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.63■□□□□ 0.89
SMG5Q9UPR3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMG5Q9UPR3 PRKY-204ENST00000533551 1019 ntBASIC20.63■□□□□ 0.89
SMG5Q9UPR3 AL590326.2-201ENST00000625139 305 ntBASIC20.63■□□□□ 0.89
SMG5Q9UPR3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SMG5Q9UPR3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMG5Q9UPR3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMG5Q9UPR3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SMG5Q9UPR3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.63■□□□□ 0.89
SMG5Q9UPR3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMG5Q9UPR3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMG5Q9UPR3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMG5Q9UPR3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SMG5Q9UPR3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMG5Q9UPR3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.62■□□□□ 0.89
SMG5Q9UPR3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMG5Q9UPR3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.62■□□□□ 0.89
SMG5Q9UPR3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.62■□□□□ 0.89
SMG5Q9UPR3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMG5Q9UPR3 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.62■□□□□ 0.89
SMG5Q9UPR3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.62■□□□□ 0.89
SMG5Q9UPR3 AL049597.2-201ENST00000565575 961 ntBASIC20.62■□□□□ 0.89
SMG5Q9UPR3 AC110285.5-201ENST00000611501 352 ntBASIC20.62■□□□□ 0.89
SMG5Q9UPR3 TCF3P1-201ENST00000423021 1937 ntBASIC20.62■□□□□ 0.89
SMG5Q9UPR3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SMG5Q9UPR3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SMG5Q9UPR3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SMG5Q9UPR3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
SMG5Q9UPR3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
SMG5Q9UPR3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SMG5Q9UPR3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMG5Q9UPR3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.6■□□□□ 0.89
SMG5Q9UPR3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms