Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42EP3Q9UKI2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42EP3Q9UKI2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42EP3Q9UKI2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42EP3Q9UKI2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDC42EP3Q9UKI2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42EP3Q9UKI2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.42■□□□□ 0.22
CDC42EP3Q9UKI2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 TERF1P1-201ENST00000311003 1181 ntBASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 AC087388.1-201ENST00000571370 1112 ntBASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 AC079598.2-202ENST00000546624 1451 ntBASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.41■□□□□ 0.22
CDC42EP3Q9UKI2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 AC023632.3-201ENST00000521633 145 ntBASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CDC42EP3Q9UKI2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.22
CDC42EP3Q9UKI2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CDC42EP3Q9UKI2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 LINC01006-201ENST00000333319 2292 ntBASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.39■□□□□ 0.21
CDC42EP3Q9UKI2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 KRT8P9-201ENST00000558927 1449 ntBASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 SLC25A3P1-201ENST00000443844 931 ntBASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 DUX4L26-201ENST00000489078 1255 ntBASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 FITM1-202ENST00000559294 800 ntBASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42EP3Q9UKI2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms