Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
NDE1Q9NXR1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NDE1Q9NXR1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NDE1Q9NXR1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
NDE1Q9NXR1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NDE1Q9NXR1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 AC010141.2-201ENST00000452426 721 ntBASIC19.01■□□□□ 0.63
NDE1Q9NXR1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 TPRG1LP1-201ENST00000598702 760 ntBASIC19.01■□□□□ 0.63
NDE1Q9NXR1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDE1Q9NXR1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19■□□□□ 0.63
NDE1Q9NXR1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19■□□□□ 0.63
NDE1Q9NXR1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19■□□□□ 0.63
NDE1Q9NXR1 PCDHB18P-201ENST00000524813 2368 ntBASIC19■□□□□ 0.63
NDE1Q9NXR1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
NDE1Q9NXR1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19■□□□□ 0.63
NDE1Q9NXR1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19■□□□□ 0.63
NDE1Q9NXR1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19■□□□□ 0.63
NDE1Q9NXR1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19■□□□□ 0.63
NDE1Q9NXR1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NDE1Q9NXR1 AC024257.2-201ENST00000549699 147 ntBASIC19■□□□□ 0.63
NDE1Q9NXR1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19■□□□□ 0.63
NDE1Q9NXR1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NDE1Q9NXR1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19■□□□□ 0.63
NDE1Q9NXR1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NDE1Q9NXR1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19■□□□□ 0.63
NDE1Q9NXR1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19■□□□□ 0.63
NDE1Q9NXR1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NDE1Q9NXR1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19■□□□□ 0.63
NDE1Q9NXR1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19■□□□□ 0.63
NDE1Q9NXR1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 AP001271.2-201ENST00000624018 1556 ntBASIC18.99■□□□□ 0.63
NDE1Q9NXR1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.99■□□□□ 0.63
NDE1Q9NXR1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 AL355001.2-201ENST00000620617 1191 ntBASIC18.99■□□□□ 0.63
NDE1Q9NXR1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 AC104581.1-202ENST00000635932 2618 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms