Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 AC069544.1-201ENST00000609399 999 ntBASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 AC073648.6-201ENST00000641589 218 ntBASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 AP001271.2-201ENST00000624018 1556 ntBASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.57■□□□□ 0.4
PARPBPQ9NWS1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 AC099778.1-201ENST00000568593 1911 ntBASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 AC116351.2-201ENST00000606540 1585 ntBASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PARPBPQ9NWS1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 ABHD17AP1-201ENST00000358206 933 ntBASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 TMEM191A-211ENST00000637163 1067 ntBASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PARPBPQ9NWS1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms