Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS45Q9NRW7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS45Q9NRW7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS45Q9NRW7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
VPS45Q9NRW7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
VPS45Q9NRW7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS45Q9NRW7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
VPS45Q9NRW7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS45Q9NRW7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
VPS45Q9NRW7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.3■□□□□ 0.84
VPS45Q9NRW7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
VPS45Q9NRW7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS45Q9NRW7 HLA-G-202ENST00000376815 851 ntBASIC20.3■□□□□ 0.84
VPS45Q9NRW7 HLA-G-203ENST00000376818 1127 ntBASIC20.3■□□□□ 0.84
VPS45Q9NRW7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VPS45Q9NRW7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.3■□□□□ 0.84
VPS45Q9NRW7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS45Q9NRW7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS45Q9NRW7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.3■□□□□ 0.84
VPS45Q9NRW7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS45Q9NRW7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 ARMC10P1-201ENST00000313754 855 ntBASIC20.29■□□□□ 0.84
VPS45Q9NRW7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 KRT18P35-201ENST00000510488 1269 ntBASIC20.29■□□□□ 0.84
VPS45Q9NRW7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 TCF3P1-201ENST00000423021 1937 ntBASIC20.29■□□□□ 0.84
VPS45Q9NRW7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
VPS45Q9NRW7 AL391422.3-201ENST00000603791 2761 ntBASIC20.29■□□□□ 0.84
VPS45Q9NRW7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 RN7SL850P-201ENST00000579959 291 ntBASIC20.28■□□□□ 0.84
VPS45Q9NRW7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.28■□□□□ 0.84
VPS45Q9NRW7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 AC005829.2-201ENST00000571422 1056 ntBASIC20.27■□□□□ 0.84
VPS45Q9NRW7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 AL590326.2-201ENST00000625139 305 ntBASIC20.27■□□□□ 0.84
VPS45Q9NRW7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms