Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.98■□□□□ 0.95
ARFGAP3Q9NP61 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.98■□□□□ 0.95
ARFGAP3Q9NP61 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ARFGAP3Q9NP61 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.98■□□□□ 0.95
ARFGAP3Q9NP61 KRT19P1-201ENST00000405746 1186 ntBASIC20.98■□□□□ 0.95
ARFGAP3Q9NP61 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.98■□□□□ 0.95
ARFGAP3Q9NP61 EEF1DP3-203ENST00000566025 782 ntBASIC20.98■□□□□ 0.95
ARFGAP3Q9NP61 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.98■□□□□ 0.95
ARFGAP3Q9NP61 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
ARFGAP3Q9NP61 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARFGAP3Q9NP61 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARFGAP3Q9NP61 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.98■□□□□ 0.95
ARFGAP3Q9NP61 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.98■□□□□ 0.95
ARFGAP3Q9NP61 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 AP001160.3-201ENST00000601484 763 ntBASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARFGAP3Q9NP61 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 AC004911.1-201ENST00000416316 871 ntBASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.96■□□□□ 0.95
ARFGAP3Q9NP61 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
ARFGAP3Q9NP61 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 AL032819.2-201ENST00000624543 2162 ntBASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGAP3Q9NP61 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 AC016769.1-201ENST00000409132 1010 ntBASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 AC053503.5-201ENST00000601508 636 ntBASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARFGAP3Q9NP61 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms