Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPBQ9H078 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPBQ9H078 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPBQ9H078 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLPBQ9H078 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.78■□□□□ 0.76
CLPBQ9H078 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPBQ9H078 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CLPBQ9H078 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPBQ9H078 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPBQ9H078 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPBQ9H078 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLPBQ9H078 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPBQ9H078 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.78■□□□□ 0.76
CLPBQ9H078 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPBQ9H078 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPBQ9H078 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.78■□□□□ 0.76
CLPBQ9H078 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLPBQ9H078 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
CLPBQ9H078 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.78■□□□□ 0.76
CLPBQ9H078 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPBQ9H078 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLPBQ9H078 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPBQ9H078 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLPBQ9H078 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLPBQ9H078 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPBQ9H078 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLPBQ9H078 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPBQ9H078 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.77■□□□□ 0.76
CLPBQ9H078 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
CLPBQ9H078 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.77■□□□□ 0.76
CLPBQ9H078 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPBQ9H078 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLPBQ9H078 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.77■□□□□ 0.76
CLPBQ9H078 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPBQ9H078 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLPBQ9H078 AL691432.2-201ENST00000607222 2038 ntBASIC19.77■□□□□ 0.76
CLPBQ9H078 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPBQ9H078 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLPBQ9H078 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.77■□□□□ 0.76
CLPBQ9H078 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.77■□□□□ 0.76
CLPBQ9H078 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.77■□□□□ 0.76
CLPBQ9H078 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLPBQ9H078 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.77■□□□□ 0.76
CLPBQ9H078 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.77■□□□□ 0.76
CLPBQ9H078 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPBQ9H078 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLPBQ9H078 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.77■□□□□ 0.76
CLPBQ9H078 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLPBQ9H078 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPBQ9H078 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPBQ9H078 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLPBQ9H078 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPBQ9H078 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.77■□□□□ 0.76
CLPBQ9H078 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLPBQ9H078 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CLPBQ9H078 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPBQ9H078 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPBQ9H078 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLPBQ9H078 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLPBQ9H078 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPBQ9H078 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPBQ9H078 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLPBQ9H078 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.76■□□□□ 0.75
CLPBQ9H078 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.76■□□□□ 0.75
CLPBQ9H078 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPBQ9H078 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPBQ9H078 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.76■□□□□ 0.75
CLPBQ9H078 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLPBQ9H078 AC133681.1-201ENST00000465482 601 ntBASIC19.76■□□□□ 0.75
CLPBQ9H078 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.76■□□□□ 0.75
CLPBQ9H078 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.76■□□□□ 0.75
CLPBQ9H078 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.76■□□□□ 0.75
CLPBQ9H078 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLPBQ9H078 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.76■□□□□ 0.75
CLPBQ9H078 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLPBQ9H078 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLPBQ9H078 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPBQ9H078 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.75■□□□□ 0.75
CLPBQ9H078 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPBQ9H078 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLPBQ9H078 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CLPBQ9H078 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPBQ9H078 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
CLPBQ9H078 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLPBQ9H078 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLPBQ9H078 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLPBQ9H078 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPBQ9H078 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPBQ9H078 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPBQ9H078 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPBQ9H078 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLPBQ9H078 AC239809.2-201ENST00000415381 517 ntBASIC19.75■□□□□ 0.75
CLPBQ9H078 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLPBQ9H078 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.75■□□□□ 0.75
CLPBQ9H078 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.75■□□□□ 0.75
CLPBQ9H078 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.75■□□□□ 0.75
CLPBQ9H078 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.75■□□□□ 0.75
CLPBQ9H078 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.75■□□□□ 0.75
CLPBQ9H078 MIR4497-201ENST00000583208 89 ntBASIC19.75■□□□□ 0.75
CLPBQ9H078 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms