Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.69■□□□□ 0.74
NDNQ99608 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NDNQ99608 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
NDNQ99608 AC083906.2-201ENST00000511578 360 ntBASIC19.69■□□□□ 0.74
NDNQ99608 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.69■□□□□ 0.74
NDNQ99608 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.69■□□□□ 0.74
NDNQ99608 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.69■□□□□ 0.74
NDNQ99608 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.69■□□□□ 0.74
NDNQ99608 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 AC098818.2-201ENST00000564925 2320 ntBASIC19.69■□□□□ 0.74
NDNQ99608 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.69■□□□□ 0.74
NDNQ99608 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDNQ99608 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.68■□□□□ 0.74
NDNQ99608 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.68■□□□□ 0.74
NDNQ99608 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDNQ99608 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NDNQ99608 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
NDNQ99608 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.68■□□□□ 0.74
NDNQ99608 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.68■□□□□ 0.74
NDNQ99608 MIPEPP3-201ENST00000412105 444 ntBASIC19.68■□□□□ 0.74
NDNQ99608 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.68■□□□□ 0.74
NDNQ99608 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDNQ99608 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NDNQ99608 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.68■□□□□ 0.74
NDNQ99608 AL121832.2-201ENST00000610979 668 ntBASIC19.68■□□□□ 0.74
NDNQ99608 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.68■□□□□ 0.74
NDNQ99608 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NDNQ99608 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDNQ99608 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.68■□□□□ 0.74
NDNQ99608 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDNQ99608 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDNQ99608 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDNQ99608 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NDNQ99608 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDNQ99608 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDNQ99608 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDNQ99608 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NDNQ99608 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NDNQ99608 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.67■□□□□ 0.74
NDNQ99608 PHGDH-210ENST00000641115 1638 ntBASIC19.67■□□□□ 0.74
NDNQ99608 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDNQ99608 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDNQ99608 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.67■□□□□ 0.74
NDNQ99608 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.67■□□□□ 0.74
NDNQ99608 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDNQ99608 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDNQ99608 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NDNQ99608 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDNQ99608 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDNQ99608 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDNQ99608 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NDNQ99608 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NDNQ99608 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.67■□□□□ 0.74
NDNQ99608 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.67■□□□□ 0.74
NDNQ99608 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NDNQ99608 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NDNQ99608 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.66■□□□□ 0.74
NDNQ99608 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDNQ99608 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDNQ99608 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NDNQ99608 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NDNQ99608 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDNQ99608 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NDNQ99608 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDNQ99608 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.66■□□□□ 0.74
NDNQ99608 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NDNQ99608 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDNQ99608 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDNQ99608 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDNQ99608 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
NDNQ99608 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.66■□□□□ 0.74
NDNQ99608 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDNQ99608 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDNQ99608 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NDNQ99608 AP001271.2-201ENST00000624018 1556 ntBASIC19.66■□□□□ 0.74
NDNQ99608 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NDNQ99608 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDNQ99608 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDNQ99608 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDNQ99608 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NDNQ99608 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDNQ99608 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.65■□□□□ 0.74
NDNQ99608 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NDNQ99608 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.65■□□□□ 0.74
NDNQ99608 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.65■□□□□ 0.74
NDNQ99608 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDNQ99608 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.65■□□□□ 0.74
NDNQ99608 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.65■□□□□ 0.74
NDNQ99608 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.65■□□□□ 0.74
NDNQ99608 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.65■□□□□ 0.74
NDNQ99608 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NDNQ99608 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.65■□□□□ 0.74
NDNQ99608 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDNQ99608 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms