Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.3■■□□□ 1.32
NEK1Q96PY6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.3■■□□□ 1.32
NEK1Q96PY6 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.3■■□□□ 1.32
NEK1Q96PY6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
NEK1Q96PY6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.3■■□□□ 1.32
NEK1Q96PY6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
NEK1Q96PY6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK1Q96PY6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK1Q96PY6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
NEK1Q96PY6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
NEK1Q96PY6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
NEK1Q96PY6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK1Q96PY6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK1Q96PY6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK1Q96PY6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK1Q96PY6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK1Q96PY6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NEK1Q96PY6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.29■■□□□ 1.32
NEK1Q96PY6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK1Q96PY6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.29■■□□□ 1.32
NEK1Q96PY6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.29■■□□□ 1.32
NEK1Q96PY6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.29■■□□□ 1.32
NEK1Q96PY6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
NEK1Q96PY6 AC116562.4-201ENST00000641316 2276 ntBASIC23.29■■□□□ 1.32
NEK1Q96PY6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK1Q96PY6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.28■■□□□ 1.32
NEK1Q96PY6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NEK1Q96PY6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NEK1Q96PY6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.28■■□□□ 1.32
NEK1Q96PY6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.28■■□□□ 1.32
NEK1Q96PY6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.28■■□□□ 1.32
NEK1Q96PY6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NEK1Q96PY6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NEK1Q96PY6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NEK1Q96PY6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.28■■□□□ 1.32
NEK1Q96PY6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
NEK1Q96PY6 RNA5SP413-201ENST00000516373 109 ntBASIC23.28■■□□□ 1.32
NEK1Q96PY6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.28■■□□□ 1.32
NEK1Q96PY6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.28■■□□□ 1.32
NEK1Q96PY6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.27■■□□□ 1.32
NEK1Q96PY6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
NEK1Q96PY6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.27■■□□□ 1.32
NEK1Q96PY6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
NEK1Q96PY6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NEK1Q96PY6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.27■■□□□ 1.32
NEK1Q96PY6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.27■■□□□ 1.32
NEK1Q96PY6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.27■■□□□ 1.32
NEK1Q96PY6 AC008403.3-201ENST00000598924 454 ntBASIC23.27■■□□□ 1.32
NEK1Q96PY6 AL121906.2-201ENST00000621597 723 ntBASIC23.27■■□□□ 1.32
NEK1Q96PY6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.27■■□□□ 1.32
NEK1Q96PY6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
NEK1Q96PY6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.27■■□□□ 1.32
NEK1Q96PY6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NEK1Q96PY6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NEK1Q96PY6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
NEK1Q96PY6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
NEK1Q96PY6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
NEK1Q96PY6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.26■■□□□ 1.31
NEK1Q96PY6 KRT18P6-201ENST00000555540 1265 ntBASIC23.26■■□□□ 1.31
NEK1Q96PY6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.26■■□□□ 1.31
NEK1Q96PY6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
NEK1Q96PY6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
NEK1Q96PY6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NEK1Q96PY6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
NEK1Q96PY6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NEK1Q96PY6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
NEK1Q96PY6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
NEK1Q96PY6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NEK1Q96PY6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NEK1Q96PY6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.25■■□□□ 1.31
NEK1Q96PY6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NEK1Q96PY6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NEK1Q96PY6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NEK1Q96PY6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NEK1Q96PY6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NEK1Q96PY6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NEK1Q96PY6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NEK1Q96PY6 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.25■■□□□ 1.31
NEK1Q96PY6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NEK1Q96PY6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.25■■□□□ 1.31
NEK1Q96PY6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.25■■□□□ 1.31
NEK1Q96PY6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NEK1Q96PY6 AL121829.2-201ENST00000620908 328 ntBASIC23.25■■□□□ 1.31
NEK1Q96PY6 TMEM191A-211ENST00000637163 1067 ntBASIC23.25■■□□□ 1.31
NEK1Q96PY6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.25■■□□□ 1.31
NEK1Q96PY6 AC093484.2-201ENST00000580996 2166 ntBASIC23.25■■□□□ 1.31
NEK1Q96PY6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.25■■□□□ 1.31
NEK1Q96PY6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.25■■□□□ 1.31
NEK1Q96PY6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
NEK1Q96PY6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
NEK1Q96PY6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NEK1Q96PY6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NEK1Q96PY6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.24■■□□□ 1.31
NEK1Q96PY6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.24■■□□□ 1.31
NEK1Q96PY6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.24■■□□□ 1.31
NEK1Q96PY6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NEK1Q96PY6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.24■■□□□ 1.31
NEK1Q96PY6 POM121L13P-201ENST00000422362 380 ntBASIC23.24■■□□□ 1.31
NEK1Q96PY6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.24■■□□□ 1.31
NEK1Q96PY6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms