Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 KRT8P20-201ENST00000423953 1409 ntBASIC16.92■□□□□ 0.3
CMTM3Q96MX0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMTM3Q96MX0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 BICD1-207ENST00000551848 1962 ntBASIC16.91■□□□□ 0.3
CMTM3Q96MX0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CMTM3Q96MX0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.9■□□□□ 0.3
CMTM3Q96MX0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CMTM3Q96MX0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CMTM3Q96MX0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CMTM3Q96MX0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.89■□□□□ 0.3
CMTM3Q96MX0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.89■□□□□ 0.3
CMTM3Q96MX0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CMTM3Q96MX0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 AC131212.1-201ENST00000613771 668 ntBASIC16.89■□□□□ 0.29
CMTM3Q96MX0 NOC2LP2-201ENST00000407594 1944 ntBASIC16.89■□□□□ 0.29
CMTM3Q96MX0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CMTM3Q96MX0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 AC104581.1-202ENST00000635932 2618 ntBASIC16.88■□□□□ 0.29
CMTM3Q96MX0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CMTM3Q96MX0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms