Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 EMBP1-201ENST00000458200 901 ntBASIC21.59■■□□□ 1.05
ALPK3Q96L96 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALPK3Q96L96 TFP1-202ENST00000475455 1573 ntBASIC21.59■■□□□ 1.05
ALPK3Q96L96 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ALPK3Q96L96 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.59■■□□□ 1.05
ALPK3Q96L96 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALPK3Q96L96 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALPK3Q96L96 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.59■■□□□ 1.05
ALPK3Q96L96 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
ALPK3Q96L96 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.59■■□□□ 1.05
ALPK3Q96L96 CA15P1-201ENST00000481698 905 ntBASIC21.59■■□□□ 1.05
ALPK3Q96L96 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.59■■□□□ 1.05
ALPK3Q96L96 SLC25A6P4-201ENST00000586535 553 ntBASIC21.59■■□□□ 1.05
ALPK3Q96L96 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ALPK3Q96L96 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ALPK3Q96L96 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
ALPK3Q96L96 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ALPK3Q96L96 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.58■■□□□ 1.04
ALPK3Q96L96 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.58■■□□□ 1.04
ALPK3Q96L96 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
ALPK3Q96L96 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ALPK3Q96L96 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.58■■□□□ 1.04
ALPK3Q96L96 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ALPK3Q96L96 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ALPK3Q96L96 AC116351.2-201ENST00000606540 1585 ntBASIC21.58■■□□□ 1.04
ALPK3Q96L96 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.58■■□□□ 1.04
ALPK3Q96L96 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
ALPK3Q96L96 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.57■■□□□ 1.04
ALPK3Q96L96 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALPK3Q96L96 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALPK3Q96L96 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALPK3Q96L96 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALPK3Q96L96 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.57■■□□□ 1.04
ALPK3Q96L96 AL845331.1-201ENST00000424978 1190 ntBASIC21.57■■□□□ 1.04
ALPK3Q96L96 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALPK3Q96L96 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALPK3Q96L96 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.57■■□□□ 1.04
ALPK3Q96L96 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.57■■□□□ 1.04
ALPK3Q96L96 LINC01311-201ENST00000565162 1445 ntBASIC21.57■■□□□ 1.04
ALPK3Q96L96 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ALPK3Q96L96 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
ALPK3Q96L96 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ALPK3Q96L96 AL645929.1-201ENST00000420084 975 ntBASIC21.57■■□□□ 1.04
ALPK3Q96L96 TSPY12P-201ENST00000421279 868 ntBASIC21.57■■□□□ 1.04
ALPK3Q96L96 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ALPK3Q96L96 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.57■■□□□ 1.04
ALPK3Q96L96 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ALPK3Q96L96 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ALPK3Q96L96 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.56■■□□□ 1.04
ALPK3Q96L96 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ALPK3Q96L96 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
ALPK3Q96L96 AC018553.1-201ENST00000616682 1458 ntBASIC21.56■■□□□ 1.04
ALPK3Q96L96 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.56■■□□□ 1.04
ALPK3Q96L96 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ALPK3Q96L96 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.56■■□□□ 1.04
ALPK3Q96L96 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ALPK3Q96L96 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ALPK3Q96L96 AC092119.3-201ENST00000612618 583 ntBASIC21.56■■□□□ 1.04
ALPK3Q96L96 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.56■■□□□ 1.04
ALPK3Q96L96 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.56■■□□□ 1.04
ALPK3Q96L96 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ALPK3Q96L96 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.56■■□□□ 1.04
ALPK3Q96L96 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALPK3Q96L96 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALPK3Q96L96 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALPK3Q96L96 KRT8P17-201ENST00000453110 1448 ntBASIC21.55■■□□□ 1.04
ALPK3Q96L96 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALPK3Q96L96 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALPK3Q96L96 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALPK3Q96L96 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALPK3Q96L96 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ALPK3Q96L96 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 AL031432.5-201ENST00000641059 760 ntBASIC21.55■■□□□ 1.04
ALPK3Q96L96 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.55■■□□□ 1.04
ALPK3Q96L96 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ALPK3Q96L96 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.54■■□□□ 1.04
ALPK3Q96L96 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ALPK3Q96L96 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.54■■□□□ 1.04
ALPK3Q96L96 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ALPK3Q96L96 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ALPK3Q96L96 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ALPK3Q96L96 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ALPK3Q96L96 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
ALPK3Q96L96 AP000523.1-201ENST00000398242 1049 ntBASIC21.54■■□□□ 1.04
ALPK3Q96L96 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ALPK3Q96L96 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms