Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPG11Q96JI7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPG11Q96JI7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPG11Q96JI7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPG11Q96JI7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.72■□□□□ 0.27
SPG11Q96JI7 AL691432.3-201ENST00000621860 400 ntBASIC16.72■□□□□ 0.27
SPG11Q96JI7 AC233723.2-201ENST00000623798 2106 ntBASIC16.72■□□□□ 0.27
SPG11Q96JI7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.72■□□□□ 0.27
SPG11Q96JI7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPG11Q96JI7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPG11Q96JI7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPG11Q96JI7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPG11Q96JI7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SPG11Q96JI7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SPG11Q96JI7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SPG11Q96JI7 Z85996.1-201ENST00000494644 937 ntBASIC16.71■□□□□ 0.27
SPG11Q96JI7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.71■□□□□ 0.27
SPG11Q96JI7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPG11Q96JI7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPG11Q96JI7 MIR2861-201ENST00000636310 90 ntBASIC16.71■□□□□ 0.27
SPG11Q96JI7 AC242852.2-201ENST00000615738 1807 ntBASIC16.71■□□□□ 0.27
SPG11Q96JI7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPG11Q96JI7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SPG11Q96JI7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPG11Q96JI7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SPG11Q96JI7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SPG11Q96JI7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPG11Q96JI7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPG11Q96JI7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPG11Q96JI7 CCR12P-201ENST00000446203 998 ntBASIC16.71■□□□□ 0.27
SPG11Q96JI7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.71■□□□□ 0.27
SPG11Q96JI7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.71■□□□□ 0.27
SPG11Q96JI7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.71■□□□□ 0.27
SPG11Q96JI7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.71■□□□□ 0.26
SPG11Q96JI7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SPG11Q96JI7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
SPG11Q96JI7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SPG11Q96JI7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.7■□□□□ 0.26
SPG11Q96JI7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.7■□□□□ 0.26
SPG11Q96JI7 AC010653.2-201ENST00000623505 997 ntBASIC16.7■□□□□ 0.26
SPG11Q96JI7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPG11Q96JI7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPG11Q96JI7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.7■□□□□ 0.26
SPG11Q96JI7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.7■□□□□ 0.26
SPG11Q96JI7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.7■□□□□ 0.26
SPG11Q96JI7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.7■□□□□ 0.26
SPG11Q96JI7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
SPG11Q96JI7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.7■□□□□ 0.26
SPG11Q96JI7 MFAP1P1-201ENST00000442257 1255 ntBASIC16.7■□□□□ 0.26
SPG11Q96JI7 YBX1P10-201ENST00000444752 975 ntBASIC16.7■□□□□ 0.26
SPG11Q96JI7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.7■□□□□ 0.26
SPG11Q96JI7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.7■□□□□ 0.26
SPG11Q96JI7 AC093458.2-201ENST00000623150 629 ntBASIC16.7■□□□□ 0.26
SPG11Q96JI7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPG11Q96JI7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SPG11Q96JI7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPG11Q96JI7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.7■□□□□ 0.26
SPG11Q96JI7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPG11Q96JI7 AC005229.4-201ENST00000610085 2198 ntBASIC16.7■□□□□ 0.26
SPG11Q96JI7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SPG11Q96JI7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.69■□□□□ 0.26
SPG11Q96JI7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPG11Q96JI7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SPG11Q96JI7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPG11Q96JI7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SPG11Q96JI7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.69■□□□□ 0.26
SPG11Q96JI7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPG11Q96JI7 PKD1P6-201ENST00000343738 4769 ntBASIC16.69■□□□□ 0.26
SPG11Q96JI7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SPG11Q96JI7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SPG11Q96JI7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.69■□□□□ 0.26
SPG11Q96JI7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.69■□□□□ 0.26
SPG11Q96JI7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.69■□□□□ 0.26
SPG11Q96JI7 AC140113.3-201ENST00000605663 199 ntBASIC16.69■□□□□ 0.26
SPG11Q96JI7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPG11Q96JI7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPG11Q96JI7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.69■□□□□ 0.26
SPG11Q96JI7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SPG11Q96JI7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SPG11Q96JI7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SPG11Q96JI7 SLC25A1P2-201ENST00000430693 912 ntBASIC16.68■□□□□ 0.26
SPG11Q96JI7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
SPG11Q96JI7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SPG11Q96JI7 KRT8P20-201ENST00000423953 1409 ntBASIC16.68■□□□□ 0.26
SPG11Q96JI7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPG11Q96JI7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SPG11Q96JI7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPG11Q96JI7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPG11Q96JI7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.68■□□□□ 0.26
SPG11Q96JI7 FDX1P1-201ENST00000449115 551 ntBASIC16.68■□□□□ 0.26
SPG11Q96JI7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.68■□□□□ 0.26
SPG11Q96JI7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.68■□□□□ 0.26
SPG11Q96JI7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.68■□□□□ 0.26
SPG11Q96JI7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.68■□□□□ 0.26
SPG11Q96JI7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SPG11Q96JI7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.68■□□□□ 0.26
SPG11Q96JI7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.68■□□□□ 0.26
SPG11Q96JI7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.68■□□□□ 0.26
SPG11Q96JI7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.68■□□□□ 0.26
SPG11Q96JI7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms