Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TIMD4Q96H15 TFP1-202ENST00000475455 1573 ntBASIC16.53■□□□□ 0.24
TIMD4Q96H15 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMD4Q96H15 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMD4Q96H15 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.53■□□□□ 0.24
TIMD4Q96H15 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TIMD4Q96H15 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.53■□□□□ 0.24
TIMD4Q96H15 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.53■□□□□ 0.24
TIMD4Q96H15 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TIMD4Q96H15 AC073195.1-201ENST00000607241 877 ntBASIC16.53■□□□□ 0.24
TIMD4Q96H15 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
TIMD4Q96H15 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TIMD4Q96H15 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.53■□□□□ 0.24
TIMD4Q96H15 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TIMD4Q96H15 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMD4Q96H15 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMD4Q96H15 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.53■□□□□ 0.24
TIMD4Q96H15 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TIMD4Q96H15 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMD4Q96H15 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.53■□□□□ 0.24
TIMD4Q96H15 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMD4Q96H15 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TIMD4Q96H15 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.52■□□□□ 0.24
TIMD4Q96H15 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TIMD4Q96H15 BX119927.1-201ENST00000636596 1552 ntBASIC16.52■□□□□ 0.24
TIMD4Q96H15 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
TIMD4Q96H15 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TIMD4Q96H15 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TIMD4Q96H15 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TIMD4Q96H15 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TIMD4Q96H15 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.52■□□□□ 0.24
TIMD4Q96H15 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.52■□□□□ 0.24
TIMD4Q96H15 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TIMD4Q96H15 TUBB8P6-201ENST00000436895 1288 ntBASIC16.52■□□□□ 0.24
TIMD4Q96H15 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TIMD4Q96H15 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TIMD4Q96H15 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.52■□□□□ 0.24
TIMD4Q96H15 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.52■□□□□ 0.24
TIMD4Q96H15 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.52■□□□□ 0.24
TIMD4Q96H15 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.52■□□□□ 0.24
TIMD4Q96H15 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.52■□□□□ 0.24
TIMD4Q96H15 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TIMD4Q96H15 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TIMD4Q96H15 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TIMD4Q96H15 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TIMD4Q96H15 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TIMD4Q96H15 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TIMD4Q96H15 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.52■□□□□ 0.23
TIMD4Q96H15 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TIMD4Q96H15 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TIMD4Q96H15 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.52■□□□□ 0.23
TIMD4Q96H15 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
TIMD4Q96H15 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 AL355355.2-201ENST00000442321 338 ntBASIC16.51■□□□□ 0.23
TIMD4Q96H15 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 AC113410.3-201ENST00000623366 203 ntBASIC16.51■□□□□ 0.23
TIMD4Q96H15 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TIMD4Q96H15 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIMD4Q96H15 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.5■□□□□ 0.23
TIMD4Q96H15 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.5■□□□□ 0.23
TIMD4Q96H15 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIMD4Q96H15 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIMD4Q96H15 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.5■□□□□ 0.23
TIMD4Q96H15 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIMD4Q96H15 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIMD4Q96H15 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.5■□□□□ 0.23
TIMD4Q96H15 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TIMD4Q96H15 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TIMD4Q96H15 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.5■□□□□ 0.23
TIMD4Q96H15 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms