Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.57■□□□□ 0.72
SCAMP4Q969E2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.57■□□□□ 0.72
SCAMP4Q969E2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.57■□□□□ 0.72
SCAMP4Q969E2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCAMP4Q969E2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SCAMP4Q969E2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SCAMP4Q969E2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCAMP4Q969E2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCAMP4Q969E2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCAMP4Q969E2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SCAMP4Q969E2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 Z99916.2-201ENST00000604037 246 ntBASIC19.56■□□□□ 0.72
SCAMP4Q969E2 AC004264.1-201ENST00000608354 794 ntBASIC19.56■□□□□ 0.72
SCAMP4Q969E2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 AC009237.14-201ENST00000609975 1594 ntBASIC19.56■□□□□ 0.72
SCAMP4Q969E2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.56■□□□□ 0.72
SCAMP4Q969E2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 AC073130.3-201ENST00000624389 2278 ntBASIC19.55■□□□□ 0.72
SCAMP4Q969E2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCAMP4Q969E2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 YBX1P10-201ENST00000444752 975 ntBASIC19.54■□□□□ 0.72
SCAMP4Q969E2 RPS2P4-201ENST00000476944 856 ntBASIC19.54■□□□□ 0.72
SCAMP4Q969E2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.54■□□□□ 0.72
SCAMP4Q969E2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms