Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.19■□□□□ 0.66
ATL1Q8WXF7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.19■□□□□ 0.66
ATL1Q8WXF7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATL1Q8WXF7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
ATL1Q8WXF7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.19■□□□□ 0.66
ATL1Q8WXF7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.19■□□□□ 0.66
ATL1Q8WXF7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATL1Q8WXF7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATL1Q8WXF7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATL1Q8WXF7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATL1Q8WXF7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATL1Q8WXF7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATL1Q8WXF7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATL1Q8WXF7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 SOX15-203ENST00000570788 1093 ntBASIC19.17■□□□□ 0.66
ATL1Q8WXF7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 AC120498.8-201ENST00000614275 531 ntBASIC19.17■□□□□ 0.66
ATL1Q8WXF7 AL121906.2-201ENST00000621597 723 ntBASIC19.17■□□□□ 0.66
ATL1Q8WXF7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 TFP1-202ENST00000475455 1573 ntBASIC19.17■□□□□ 0.66
ATL1Q8WXF7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ATL1Q8WXF7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 AC125437.2-201ENST00000625180 2167 ntBASIC19.16■□□□□ 0.66
ATL1Q8WXF7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATL1Q8WXF7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms