Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 PCDHB18P-201ENST00000524813 2368 ntBASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 AL133373.2-201ENST00000623187 2828 ntBASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 CCDC92B-201ENST00000575506 885 ntBASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 AL354811.1-201ENST00000610286 706 ntBASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.53■□□□□ 0.72
CKAP2Q8WWK9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 WIZP1-201ENST00000531444 2299 ntBASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 AP001160.3-201ENST00000601484 763 ntBASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.52■□□□□ 0.72
CKAP2Q8WWK9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CKAP2Q8WWK9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CKAP2Q8WWK9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CKAP2Q8WWK9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CKAP2Q8WWK9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CKAP2Q8WWK9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CKAP2Q8WWK9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CKAP2Q8WWK9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.52■□□□□ 0.71
CKAP2Q8WWK9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 IRS3P-201ENST00000223076 1006 ntBASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 AC097381.1-201ENST00000429019 1296 ntBASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 CDV3P1-201ENST00000471403 739 ntBASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 AL031598.1-201ENST00000561511 1773 ntBASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.51■□□□□ 0.71
CKAP2Q8WWK9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms